Gene Information

Name : Sbal195_0294 (Sbal195_0294)
Accession : YP_001552736.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 333764 - 334441 bp
Length : 678 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: shw:Sputw3181_0251 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGAAAATACTTTTAGTTGAAGATGATGCGACGACGATTGATTACATCGTCAAAGGATTTCTTGAGCAGGGTCACAATAT
CGAAACGGCGAGCGATGGCCACCAAGGTTTGTCACTCGCCACGAGTAGTCAGTACGATCTCGTGATCCTCGACCGCATGT
TACCCCAGCTCGATGGCTTGAAATTATTGGCCGCCTTAAGGGCAACGGGCAATCAAACCCCAGTGCTGATTTTATCTGCC
TTAGCGCACGTTGATGAGCGAGTGAAAGGCTTGCGCGCGGGCGGCGACGACTATATGACTAAGCCGTTTGCCTTCTCTGA
GTTATTAGTGCGCGCCGAAAAACTCATGCACCGTGGTCAATCTGTGCCTGTCACCACAGATCTCGTTGTCGGTGGTTTGA
AGATGGAGTTACTGACCCGTAATGTGACCTTAGACGGGCAAGAGTTGTTGCTGCAGCCAAAAGAGTTCCAGTTACTTAAG
TATCTAATGGAACATGCGAATCAAGTGATTAGCCGCACCTTGTTGTTCGAAGCGGTGTGGGATTATCACTTCGACCCACG
CACGAACGTTATCGATGTGCATATCGCAAAATTACGCCGTAAGTTTGAAGAGTTAGGCCATGGCGAGCTTATCGAAACCG
TGAGGGGAGCGGGTTATCGCTTACGACAAAGGCATTAA

Protein sequence : 
MKILLVEDDATTIDYIVKGFLEQGHNIETASDGHQGLSLATSSQYDLVILDRMLPQLDGLKLLAALRATGNQTPVLILSA
LAHVDERVKGLRAGGDDYMTKPFAFSELLVRAEKLMHRGQSVPVTTDLVVGGLKMELLTRNVTLDGQELLLQPKEFQLLK
YLMEHANQVISRTLLFEAVWDYHFDPRTNVIDVHIAKLRRKFEELGHGELIETVRGAGYRLRQRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-43 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-43 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal195_0294 YP_001552736.1 two component transcriptional regulator BAC0083 Protein 1e-42 45
Sbal195_0294 YP_001552736.1 two component transcriptional regulator BAC0347 Protein 4e-45 44
Sbal195_0294 YP_001552736.1 two component transcriptional regulator BAC0197 Protein 5e-40 43
Sbal195_0294 YP_001552736.1 two component transcriptional regulator BAC0111 Protein 1e-47 43
Sbal195_0294 YP_001552736.1 two component transcriptional regulator BAC0638 Protein 1e-38 43
Sbal195_0294 YP_001552736.1 two component transcriptional regulator BAC0308 Protein 4e-43 42
Sbal195_0294 YP_001552736.1 two component transcriptional regulator BAC0125 Protein 2e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal195_0294 YP_001552736.1 two component transcriptional regulator VFG0596 Protein 6e-44 46
Sbal195_0294 YP_001552736.1 two component transcriptional regulator VFG1389 Protein 4e-36 43