Gene Information

Name : Sbal195_3019 (Sbal195_3019)
Accession : YP_001555444.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 3589070 - 3590263 bp
Length : 1194 bp
Strand : -
Note : KEGG: she:Shewmr4_1330 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase

DNA sequence :
ATGGTCTTATCAAATACTGGAAGTAAAATGAAAATTGCTATTGCTGGTACAGGTTATGTCGGCCTCTCAAATGCTGTGTT
ATTAGCTCAGCACCATCAAGTTTTTGCGGTTGATGTTATCGCTGATAAGGTTGCGTCAATTAACAATCGTAAGTCACCGA
TTATTGATGCCGAGATAGAAGATTTTTTAACACATCGAGAGCTTAATTTAACTGCGACCTTGGATAAGCAACTTGCTTAT
CAAGATGCTGAATTTGTGATCATTGCGACGCCAACGGATTATGATCCAAAAACCAATTATTTTAATACTTCCTCTGTTGA
GTCGGTTATTCAAGATGTTATTGGCATTAACCCTAATGCGGTGATGGTGATCAAATCTACCGTGCCAGTGGGCTTTACTG
CCAAGGTTAAGCAAAAATATCATTGCGATAATATTCTCTTTTCGCCAGAGTTTTTGCGTGAGGGTCGGGCGCTTTACGAC
AATTTGCATCCATCGCGCATTATTGTTGGTGAACGTAGTGAACGTGCTAAAGTGTTTGCCGATTTATTAGTGCAAGGCGC
CATAAAAAAAGATATTCAAGTCTTATTTACTGATAGCACTGAAGCTGAGGCAGTTAAATTATTTTCTAACACTTATCTTG
CTATGCGTGTTGCTTATTTTAACGAACTTGATACTTATGCTGAAACTCATGGGCTAGATTCTCGGCAGATTATTGAGGGG
GTGTGTTTAGATCCGCGAATTGGTGATCATTACAATAATCCTTCTTTTGGTTATGGTGGTTATTGCTTACCTAAAGATAC
CAAACAACTGCGAGCGAACTATGCCGATGTGCCTAATAGCATTATTGGTGCGATTGTGGAATCTAATACCACCCGTAAAG
ACTTTATCGCTGACTCTATTTTAAGCCGTAATCCTAAGGTTGTCGGTATTTATCGGCTGATTATGAAGTCTGGTTCTGAT
AATTTTAGAGCCTCGAGTATTCAAGGGATTATGAAACGCCTCAAGGCTAAAGGTGTAGAGGTCATAGTGTATGAGCCAGT
ACTTAAAGAGAAAGAGTTCTTCCATTCCCGTGTAGTTACCGATTTAACAGCCTTTAAAGTTGCTTCTGATGTGATTGTCT
CAAACCGTATGGCCAAAGAACTGGCGGATGTTGCTGATAAGGTTTATACACGCGATCTGTTTGGGAGTGACTAA

Protein sequence :
MVLSNTGSKMKIAIAGTGYVGLSNAVLLAQHHQVFAVDVIADKVASINNRKSPIIDAEIEDFLTHRELNLTATLDKQLAY
QDAEFVIIATPTDYDPKTNYFNTSSVESVIQDVIGINPNAVMVIKSTVPVGFTAKVKQKYHCDNILFSPEFLREGRALYD
NLHPSRIIVGERSERAKVFADLLVQGAIKKDIQVLFTDSTEAEAVKLFSNTYLAMRVAYFNELDTYAETHGLDSRQIIEG
VCLDPRIGDHYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFIADSILSRNPKVVGIYRLIMKSGSD
NFRASSIQGIMKRLKAKGVEVIVYEPVLKEKEFFHSRVVTDLTAFKVASDVIVSNRMAKELADVADKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 8e-97 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal195_3019 YP_001555444.1 nucleotide sugar dehydrogenase VFG0963 Protein 4e-101 55