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Name : Sbal195_2953 (Sbal195_2953) Accession : YP_001555379.1 Strain : Shewanella baltica OS195 Genome accession: NC_009997 Putative virulence/resistance : Virulence Product : Fis family two component sigma54 specific transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 3505359 - 3506738 bp Length : 1380 bp Strand : + Note : PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: shw:Sputw3181_1504 two component, sigma54 specific, tra DNA sequence : ATGAGTGTGCCCAATTCCATCCAAGATTATTCTGTTCTCATCATCGACGATGAGCCACACATAGGCACAGTTCTCGTTCA GCTATTTGAACTTGAGGGCATTAAGGCGCTCGCCACCACAGAGCCTAAAGGGATCGCTAAGCACCTGCATAAAGATTGGG CGGGAATGGTGATATCAGATGTCAACATGCCGCAATTAGATGGCATCAGCTTAATGCAACAAATCCGCCTGCAGGACCCC GACCTCCCCGTTGTGTTATTGACAGGGTTTGGGGATATCGCCATGGCAGTCAATGCCTTAAAGCAAGGTGCCTACGACTT TCTCGAAAAGCCCTTTAATAACGAGCATATACTCGATGTGGTCAAGCGCGCCTTAGATAAACGCAGCCTGACCCTAGAGA ACCGTAAGCTTAAAAAGGATCTCGAAAGCCAGAGCGTACCGGGCCCTCGCATTTTGGGTAACAGCGTCGGCATCAACCGC ATGCGCCACATCATAGATCAAGTGATAGATACCCCCGCTGACGTGTTAATCGAGGGGGAAACAGGCACAGGTAAAGAGCT CGTCGCCCGCTATTTACACGATCACAGCAGCCGCAGCCAAGCCAACTTTGTCGCCATCAACTGTGGTGCGATCCCCGAAA ACTTAATTGAAAGTGAGCTCTTTGGCGCCGAAGCAGGTGCCTTTACCGGCGTCGATAAGATGCGCATTGGTAAGTTTGAA TACGCCAACGGCGGCACATTATTTTTAGATGAAATTGAAAGTACACCACTGTCGCTGCAGGTCAAACTTCTACGGGTACT TGAAGATCGTAAAGTTGAACGCTTAGGGTCAAACAAAAGCATCAGCCTTGATATACGGGTAATTGCCGCCACTAAGGTGG ATTTAAAAAGCTTGTGTGACACGGGGGAGTTTCGCCAAGACTTGTTGTATCGCTTAAATCTGGTGACTGTGCCTATCCCT CCCCTGCGGGATCGCCGTGAAGATATTCCTTTGCTGTTCCTGCACTTTGCCCGCGTCGCATCGGCACGCTATCACAAAGC GCTTATCGCCTTAAATGCCGAGCAAAACGCCATTCTCACCTCCCACGACTGGCCGGGCAATGTGCGTGAGTTACGTAATC TCGCCGAACGCTTTGTACTGCTGGGCGGAGAAGCCGCCTTTGCTGGCACTTTGGGCAATACCCCAAGCCTGCACTCGAGT ATGTCCTTACTACAACGAGTCGAGTTTTTTGAAAGGGTATTGATTGAAGAAGCGCTCAGCCACAACAAGGGCAGCATTAA GCAGACGATGGAGCAACTGGAACTGCCCCGTAAAACCCTCTACGACAAAATGCGAAAATACGATTTAGACCGCAAGCAGT ACATTAACTCCGAGGACTAG Protein sequence : MSVPNSIQDYSVLIIDDEPHIGTVLVQLFELEGIKALATTEPKGIAKHLHKDWAGMVISDVNMPQLDGISLMQQIRLQDP DLPVVLLTGFGDIAMAVNALKQGAYDFLEKPFNNEHILDVVKRALDKRSLTLENRKLKKDLESQSVPGPRILGNSVGINR MRHIIDQVIDTPADVLIEGETGTGKELVARYLHDHSSRSQANFVAINCGAIPENLIESELFGAEAGAFTGVDKMRIGKFE YANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSISLDIRVIAATKVDLKSLCDTGEFRQDLLYRLNLVTVPIP PLRDRREDIPLLFLHFARVASARYHKALIALNAEQNAILTSHDWPGNVRELRNLAERFVLLGGEAAFAGTLGNTPSLHSS MSLLQRVEFFERVLIEEALSHNKGSIKQTMEQLELPRKTLYDKMRKYDLDRKQYINSED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | NP_791207.1 | type III transcriptional regulator HrpS | Virulence | Hrp PAI | Protein | 1e-52 | 41 |
| hrpS | AAC34753.1 | HrpS | Virulence | Hrp PAI | Protein | 2e-50 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal195_2953 | YP_001555379.1 | Fis family two component sigma54 specific transcriptional regulator | VFG1249 | Protein | 7e-63 | 42 |
