Gene Information

Name : Sbal195_2548 (Sbal195_2548)
Accession : YP_001554976.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3013088 - 3013897 bp
Length : 810 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: son:SO_A0091 ISSod1, transposase OrfB

DNA sequence :
ATGAGTGTCAGTAAGTCAGGCTATTACGATTGGCATAAACGCCCAGCAAACGTGATAAGCGTTGAAACACTGAAGCTTTA
TCGCCTTGTTCGACAGCTATTTAAGCAAAGTCGAGGCAGCTTAGGGAATCGTGAAATGGTGAAGAAATTGCGCAAGGAAG
GCTACCAGGTTGGTCGCTATCTCGTTCGTAAAATTATGCACCGCCTTCGACTCAAAGTAACCCAGCGATGTGCTTACAAG
GTGACGACACAGCGAAAACACTCAGATGCAGTGGCTGATAACCTGTTAAACATGAACTTTAATCCAGTATCGGCTAATCA
GGTCTGGGCGAGTGATGTGACCTATTTAAAGACGGGTGAAGGCTGGATGTACTTAGCTGTGGTGATGGATTTATATTCAC
GCCGGATTGTGGGATGGCACATAGACCAACGCATGACCACAGATTTGATATCCAAGGCATTAATAAAAGCCTACAACCTG
CGCCAACCGGCCAGAGGGTTGGTATTTCACAGTGACCGAGGCTCGCAATATACCAGTAAGCAATTCGGTAGGCTGCTATC
GAGCTATGGTATCCGAGCCAGCATGGGTGATGTGGGTGCGTGTTGGGATAATGCTGTTGTTGAGCGTTTCTTTGGTAGCT
TGAAACACGATTGGATTTTTAAAGTTAATCAACCAACAAGGGAGTTTATGAAGCAAGATGTGACTGCTTACATGAAATAT
TACAACTTGGAGCGGCTGCATTCTGCTAATGACGATCTGTCACCGGTAGAGTTTGAAAATTCTCAAGTAAAAGTGTCCAG
TTTGGGTTGA

Protein sequence :
MSVSKSGYYDWHKRPANVISVETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLVRKIMHRLRLKVTQRCAYK
VTTQRKHSDAVADNLLNMNFNPVSANQVWASDVTYLKTGEGWMYLAVVMDLYSRRIVGWHIDQRMTTDLISKALIKAYNL
RQPARGLVFHSDRGSQYTSKQFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVNQPTREFMKQDVTAYMKY
YNLERLHSANDDLSPVEFENSQVKVSSLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 3e-37 42
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-37 42