Gene Information

Name : Sbal195_2279 (Sbal195_2279)
Accession : YP_001554707.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Virulence
Product : HrpO family type III secretion protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4794
EC number : -
Position : 2701782 - 2702051 bp
Length : 270 bp
Strand : +
Note : TIGRFAM: type III secretion protein, HrpO family; PFAM: export protein FliQ family 3; KEGG: cvi:CV_2608 type III secretion apparatus protein EscS

DNA sequence : 
ATGAGTGAAACTATCATAGTACATTTCACCTCTGAACTACTGTGGATGGTGTTACTGCTGTCGCTACCTGTTGTTATCGT
GGCCTCAGTTGTCGGAGTTTTGGTTAGCCTTATTCAAGCCCTGACCCAAATCCAAGATCAAACATTGCAGTTTCTGATCA
AACTCATCGCCGTGTGCGTGACACTTGTGGTCTGTTATCACTGGATGGGTAGTTCACTGTTGAATTACGCCAGCATGGCT
TTCGATCAAATTAGCCAAATGGGGGGGTAG

Protein sequence : 
MSETIIVHFTSELLWMVLLLSLPVVIVASVVGVLVSLIQALTQIQDQTLQFLIKLIAVCVTLVVCYHWMGSSLLNYASMA
FDQISQMGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscS AAO18039.1 LscS Virulence TTSS locus Protein 5e-08 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal195_2279 YP_001554707.1 HrpO family type III secretion protein VFG0395 Protein 9e-08 60
Sbal195_2279 YP_001554707.1 HrpO family type III secretion protein VFG0187 Protein 0.26 52