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Name : Sbal195_2273 (Sbal195_2273) Accession : YP_001554701.1 Strain : Shewanella baltica OS195 Genome accession: NC_009997 Putative virulence/resistance : Virulence Product : secretion system apparatus protein SsaV Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 2695832 - 2697889 bp Length : 2058 bp Strand : + Note : with SsaC forms part of a protein export system across the inner and outer cell membranes; part of the Salmonella pathogenicity island 2; part of the type III secretion system DNA sequence : ATGAACCTCATTAGTCGTTGGTTAAGTAAAGCCGCAGGGCGTCACGATATCATCTTAAGTGCCATGTTAATGGTAGCTGT ATTTATGATGATCTTGCCTCTACCGACACCTTTGATCGACGTATTAATTGCCTTAAACCTTGGCTTGTCGATAGTGTTAT TGATGATCGCCATATACATCCGTGACCCTTTAGAGTTCTCAGTATTTCCATCCCTACTATTGATCACAACCTTATATCGT CTGGCACTTACTATCAGTACCAGTCGTTTAATTTTGCTGCAGCATGATGCTGGAGATATTGTATACACCTTCGGTAACTT CGTTGTCGGCGGCAACTTAGCGGTCGGAATTATTATCTTTGCCATCATCACCATAGTGCAGTTTATCGTTATCACTAAGG GGTCTGAGCGGGTGGCGGAAGTGAGTGCACGTTTTTCCCTCGATGGTATGCCTGGTAAGCAAATGAGTATCGATGGCGAC ATGCGTGCTGGCATCATTGACGCTAAAGAGGCAAAGCGTCAACGGGCACAAGTTCAGAAAGAAAGTCAGCTTTATGGCGC GATGGACGGCGCGATGAAGTTTGTAAAAGGCGATGCCATAGCCAGTATTATTGTCATTTTAACTAATATCATTGGTGGTA TCGCTGTCGGTGTCATGCAGCACAATATGTCGGCTGCAGAAGCATTAAATACTTATGCAGTCTTGTCTGTCGGGGATGGT TTGATAGCCCAAATACCTTCGTTACTGATTTCAGTCACTGCAGGCTTAATTGTGACCCGAGTTCCTGGAGAGCAGAGACA GAATTTAGCCAACGAATTAGTGATGCAAGTAGGGCGTCAACCCGCATCATTGCAAATGGCCGGGATAGTCATGTTCATCT TTGCTTTAATCCCTGGCTTCCCAATTTTAGTCTTCGGCACACTCGGTTCGGTCGTTTTAGGGGCTTCATTGTGGTTGAAG CGTCAGCAAAAACGAGCAAGTGCTCAAGGAGAGGAGAGCCATTTCACTGACGCTGGCAAAAGTGACACGGCCAATGTCGA CAATATGGCACCAGGGGCTGTACCACTGATTTTATATCTTGGAGCCGATGTGCCTATCCATGGGGTTAAAGAGGCACTGC AAAAACTACGTTGGCAATGGTTTGAACAATTGGGCGTGCCATTACCGGAAATCCAATTACAAATAGCGAAGAAAGGCAGC CTAGGTTGTTGTGATGTGCTCTTGTACCAAGAATCTGTATTGCAATTGCAGCTAGTACCACAGGAAGCCCTTTTGATTGA CTCCATCGCAACGATTCCATGCCGTGTCGAGTCCATTCCTTTTAGTAATCAAAGATTGCATTGGATCAAAGGTAATGCGC TTGAACAGGCGGAAGCCCAAGGTTTAGCTGTTTGTCGTGATGAGCAAATTCCCGCTTATGTGATGGGTAAAGTGATCGAC CGCTATGCAGGGGAGTTTATTGGTGTACAAGAAACTCGGTATTTAATGGATGCTATGGAGGCTCGCTACGGTGAGCTCGT CAAGGAACTTCAACGACTGTTGTCTGTGGGGAAGGTCGCCGAGATCCTACAACGCTTAGTCGAAGAGGGGATTTCAGTGC GCGATCTACGGACTATTTTTGAAACCTTAGTCGAATGGGTGCCAAAGGAGAAAGACATCATCATGTTAACTGAGTATGTA CGGATTGCGCTTCGCCGTCATATTCGTCGCAAGTTTGCTACCCCACAAGGTTGGATCGCTGTGCTCATGGTTGGAGAAGG AATTGAAAATGTGATCCGTGAATCGATACGACAATCGACTGCTGGCTCTTATTCGGCCTTGGACATGGCACAAACTCAGC AAATATTAACCTGCATTCAAGAACAGCTGCCACCGGAACAAACCTGTGTACTGTTGACTTCGCTCGATGTGCGCCGTTAC CTGCGAAAAATCGTAGAACGCGAGTTATTTAGCACACCCGTTTTGTCGTTTCAGGAATTAGGCGACGATGCAGAAATAAA AGTCATAGGCCAAGTGGACTTAGTGGGTGAGGTACTCGATGCCGCACTGGCGAGCTAA Protein sequence : MNLISRWLSKAAGRHDIILSAMLMVAVFMMILPLPTPLIDVLIALNLGLSIVLLMIAIYIRDPLEFSVFPSLLLITTLYR LALTISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGIIIFAIITIVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGD MRAGIIDAKEAKRQRAQVQKESQLYGAMDGAMKFVKGDAIASIIVILTNIIGGIAVGVMQHNMSAAEALNTYAVLSVGDG LIAQIPSLLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGFPILVFGTLGSVVLGASLWLK RQQKRASAQGEESHFTDAGKSDTANVDNMAPGAVPLILYLGADVPIHGVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGS LGCCDVLLYQESVLQLQLVPQEALLIDSIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVID RYAGEFIGVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIFETLVEWVPKEKDIIMLTEYV RIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQSTAGSYSALDMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRY LRKIVERELFSTPVLSFQELGDDAEIKVIGQVDLVGEVLDAALAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 3e-176 | 61 |
| ssaV | YP_216422.1 | secretion system apparatus protein SsaV | Virulence | SPI-2 | Protein | 6e-147 | 54 |
| ssaV | CAA70536.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 3e-147 | 54 |
| ssaV | NP_460379.1 | secretion system apparatus protein SsaV | Virulence | SPI-2 | Protein | 4e-147 | 54 |
| ssaV | NP_805085.1 | secretion system apparatus protein SsaV | Virulence | SPI-2 | Protein | 9e-147 | 53 |
| ssaV | NP_456114.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 9e-147 | 53 |
| escV | AAC38382.1 | EscV | Virulence | LEE | Protein | 5e-142 | 51 |
| escV | AAC31514.1 | L0035 | Virulence | LEE | Protein | 2e-141 | 51 |
| escV | NP_290269.1 | hypothetical protein | Virulence | LEE | Protein | 2e-141 | 51 |
| escV | ACU09459.1 | EscV protein | Virulence | LEE | Protein | 2e-141 | 51 |
| ECs4569 | NP_312596.1 | hypothetical protein | Virulence | LEE | Protein | 2e-141 | 51 |
| escV | AAL57541.1 | EscV | Virulence | LEE | Protein | 8e-142 | 51 |
| unnamed | AAL06368.1 | EscV | Virulence | LEE | Protein | 2e-138 | 51 |
| escV | YP_003236089.1 | putative translocator EscV | Virulence | LEE | Protein | 3e-141 | 51 |
| escV | CAC81861.1 | EscV protein | Virulence | LEE II | Protein | 2e-141 | 51 |
| escV | YP_003223476.1 | translocator EscV | Virulence | LEE | Protein | 2e-141 | 51 |
| escV | CAI43875.1 | EscV protein | Virulence | LEE | Protein | 1e-141 | 51 |
| escV | YP_003232152.1 | T3SS structure protein EscV | Virulence | LEE | Protein | 1e-141 | 51 |
| escV | AAK26714.1 | EscV | Virulence | LEE | Protein | 8e-142 | 51 |
| escV | AFO66414.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-137 | 50 |
| escV | AFO66296.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-137 | 50 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 3e-127 | 47 |
| XC_3013 | YP_244081.1 | HrcV protein | Virulence | Hrp PAI | Protein | 4e-57 | 43 |
| hrcV | NP_636603.1 | protein HrcV | Virulence | Hrp PAI | Protein | 4e-57 | 43 |
| invA | AAS66860.1 | InvA | Not tested | SSR-2 | Protein | 3e-91 | 42 |
| invA | NP_461817.1 | needle complex export protein | Virulence | SPI-1 | Protein | 2e-97 | 42 |
| invA | YP_217815.1 | invasion protein | Virulence | SPI-1 | Protein | 2e-97 | 42 |
| invA | NP_457290.1 | possible secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 2e-97 | 42 |
| invA | NP_806499.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 2e-97 | 42 |
| hrcV | YP_362156.1 | HrcV protein | Virulence | Hrp PAI | Protein | 1e-56 | 42 |
| hrcV | AAP34346.1 | HrcV | Virulence | Hrp PAI | Protein | 2e-56 | 42 |
| hrcV | YP_198723.1 | protein HrcV | Virulence | Hrp PAI | Protein | 7e-56 | 42 |
| hrcV | NP_640760.1 | HrcV protein | Virulence | Hrp PAI | Protein | 3e-56 | 42 |
| hrcV | BAB07859.1 | HrcV | Virulence | Hrp PAI | Protein | 6e-56 | 42 |
| ECs3731 | NP_311758.1 | EivA | Not tested | LIM | Protein | 9e-98 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal195_2273 | YP_001554701.1 | secretion system apparatus protein SsaV | VFG0514 | Protein | 2e-147 | 54 |
| Sbal195_2273 | YP_001554701.1 | secretion system apparatus protein SsaV | VFG0813 | Protein | 1e-141 | 51 |
| Sbal195_2273 | YP_001554701.1 | secretion system apparatus protein SsaV | VFG0729 | Protein | 3e-142 | 51 |
| Sbal195_2273 | YP_001554701.1 | secretion system apparatus protein SsaV | VFG0198 | Protein | 1e-112 | 46 |
| Sbal195_2273 | YP_001554701.1 | secretion system apparatus protein SsaV | VFG0064 | Protein | 2e-129 | 46 |
| Sbal195_2273 | YP_001554701.1 | secretion system apparatus protein SsaV | VFG0384 | Protein | 2e-127 | 45 |
| Sbal195_2273 | YP_001554701.1 | secretion system apparatus protein SsaV | VFG0557 | Protein | 7e-98 | 42 |
| Sbal195_2273 | YP_001554701.1 | secretion system apparatus protein SsaV | VFG1780 | Protein | 1e-97 | 41 |
| Sbal195_2273 | YP_001554701.1 | secretion system apparatus protein SsaV | VFG2126 | Protein | 1e-99 | 41 |
