Gene Information

Name : Sbal195_2246 (Sbal195_2246)
Accession : YP_001554674.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2669471 - 2670115 bp
Length : 645 bp
Strand : +
Note : PFAM: regulatory protein LuxR; response regulator receiver; KEGG: cvi:CV_2599 probable two-component response regulator, LuxR family

DNA sequence : 
ATGGCATTTAGTCATGGAAAAGTGATCAATATTTTAGTGGTCGATGATCATTCGTTGATTTTTGATGGATTACGGGGCTG
TTTAGCGCCTTATCCTGAACTTAATCTGATTGGCTCGGTTGAAGATGGGCTTGCGGTATACGAGAAATGTCTCAAACTCA
GGCCAGATCTGGTCTTTATGGATCTTAAATTACCCGGAATGGGTGGATTGGACGTGATCCGTCAGCTCAGACAACGTTGG
CCAGAGATGATGATTATTATGTTAACGGGGACGATTGAGGAAAAAAGTGCACGGGAAGCGCTTGATGTAGGCGCCAATGG
TTATGTATTAAAAAATAGCCCTAAGAGCACACTATTAGCGGCAATTAAGTGTGTGAGTAAGGGCAAAAATTTTATCGATC
CTAGTTTAGATGAGCAGCAAATAGACGCTTTGAGTGGAGTGGTCGATGGGGATATCCCTTTGCTGACCCCCCGTGAGCAA
CAAGTGCTAAAACTGATCTGTGAGGGGCGCCGCAACCGTGATATTGCCGAAGATTTAGTGATTGGTTTAAAAACGGTTGA
GACTCACAGGATGAATTTAATGCGCAAACTTAATGCGCATAACGTCGCCGAGTTAATGCATTGGGTACAAAGGCTTGGAT
TATGA

Protein sequence : 
MAFSHGKVINILVVDDHSLIFDGLRGCLAPYPELNLIGSVEDGLAVYEKCLKLRPDLVFMDLKLPGMGGLDVIRQLRQRW
PEMMIIMLTGTIEEKSAREALDVGANGYVLKNSPKSTLLAAIKCVSKGKNFIDPSLDEQQIDALSGVVDGDIPLLTPREQ
QVLKLICEGRRNRDIAEDLVIGLKTVETHRMNLMRKLNAHNVAELMHWVQRLGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0255 YP_002345335.1 two-component response regulator Not tested Not named Protein 1e-48 53
ssrB CAB09344.1 SsrB Virulence SPI-2 Protein 1e-36 49
ssrB YP_216399.1 secretion system transcriptonal activator Virulence SPI-2 Protein 2e-40 48
ssrB NP_456137.1 putative two-component response regulator Virulence SPI-2 Protein 1e-40 48
ssrB NP_805062.1 two-component response regulator Virulence SPI-2 Protein 1e-40 48
ssrB NP_460356.1 transcriptional activator Virulence SPI-2 Protein 1e-40 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal195_2246 YP_001554674.1 two component LuxR family transcriptional regulator VFG0492 Protein 3e-41 48