Gene Information

Name : Sbal195_1998 (Sbal195_1998)
Accession : YP_001554428.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 2382402 - 2383043 bp
Length : 642 bp
Strand : +
Note : KEGG: vch:VCA0300 chloramphenicol acetyltransferase

DNA sequence :
ATGAACTACTTTAAATCTCCTTTTTCAGGAGTTACCTTACTTGAACAAGTAACTAATCCAAACATTATTGTTGGTAAGCA
CAGCTATTATTCTGGTTATTATCATCGGCATAGCTTCGATGATTGCGTTCGGTACCTCAATCCTGACCGAGATGATGTAG
ACAAGTTGATTCTTGGAAGTTACTGCTCAATTGGCTCAGGGGCAATATTCATGATGGCTGGTAACCAAGGGCATCGACGC
GATTGGGTCAGTACTTTTCCGTTTTTCTATCAGGACAATGAAAACTTTGTCGATGCTGAAGACGGCTTTCAGCGTGCAGG
TGATACAGTCATAGGAAATGATGTTTGGATTGGCTCTGAGGCTATGATTATGTCTGGCGTAAAAGTAGGTCACGGTGCAA
TCATCGCAAGTCGTGCGGTAGTGACCAAAGATGTTGCGCCATACGAAGTCGTGGGGTCGAACCCTGCCAAGCATATTAAA
TTTCGCTTCACAGAGTCACAAATAGCGATGCTACTTGAAATGGAGTGGTGGGATTGGCCAGACTCAAAGCTTAAAGGCGG
CATGAAACAACTTTGTTCATCTGATATTGAAGGCCTTTATGATTACTGGCAGTCGGAAGTACACACATCGCATAATAAGT
AA

Protein sequence :
MNYFKSPFSGVTLLEQVTNPNIIVGKHSYYSGYYHRHSFDDCVRYLNPDRDDVDKLILGSYCSIGSGAIFMMAGNQGHRR
DWVSTFPFFYQDNENFVDAEDGFQRAGDTVIGNDVWIGSEAMIMSGVKVGHGAIIASRAVVTKDVAPYEVVGSNPAKHIK
FRFTESQIAMLLEMEWWDWPDSKLKGGMKQLCSSDIEGLYDYWQSEVHTSHNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 3e-62 70
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 3e-62 70
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 9e-63 69

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal195_1998 YP_001554428.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 1e-62 70
Sbal195_1998 YP_001554428.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 1e-62 70
Sbal195_1998 YP_001554428.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 3e-63 69
Sbal195_1998 YP_001554428.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 2e-56 65
Sbal195_1998 YP_001554428.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 4e-59 65
Sbal195_1998 YP_001554428.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 9e-37 44
Sbal195_1998 YP_001554428.1 chloramphenicol acetyltransferase NC_011595.7057349.p0 Protein 1e-27 44
Sbal195_1998 YP_001554428.1 chloramphenicol acetyltransferase NC_010410.6000796.p0 Protein 1e-27 44