|
Name : Sbal195_0155 (Sbal195_0155) Accession : YP_001552597.1 Strain : Shewanella baltica OS195 Genome accession: NC_009997 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 184862 - 186085 bp Length : 1224 bp Strand : + Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: shw:Sputw3181_3702 general secretion pathway protein F DNA sequence : ATGCCAGCATTTGAATATAAGGCACTGGATGCCAAGGGAAAGCAGCTTAAGGGCGTAATCGAGGCGGATACCGCCAGACA CGCCCGTAGCCAGTTGCGCGATCAGCGCATGATGCCCTTGGAAATTCTGCCTGTTTCCGAAAAAGAAGCCAAAGCTAAGA GCAGCAGCTTTTCGTTTTTCAAACGGGGTATCTCGGTCGCTGAGTTAGCCTTGATCACCCGTCAAATCGCGACCTTAGTG GCCGCGGGTTTACCGATTGAAGAATCCCTTAAAGCCGTTGGTCAGCAATGCGAGAAAGATCGTCTTGCGAGTATGATCAT GGCGGTACGTTCGCGGGTGGTTGAAGGTTACAGTCTGGCCGACTCCTTGGCCGAATTTCCGCACATTTTCGATGACTTAT ATCGTGCCATGGTGGCCTCGGGTGAAAAGTCCGGTCATTTAGAAGTAGTGCTTAATCGGTTGGCGGATTACACAGAGCGA CGCCAACAGCTTAAATCTAAGCTGACTCAAGCCATGATTTATCCTGCGGTATTGACCACAGTAGCGATTGGGGTGATTTC CATCCTGCTGGCGGCGGTTGTACCTAAGGTGGTTGGGCAGTTTGAACACATGGGCGCCGAGTTACCGGCTTCGACACGCT TCTTGATTTCGGCCTCTGACTTTGTACAAAACTACGGTGTGTTTGTGGTCATTGCCCTGGTGATGCTGTTCGCACTCTTT CGTCGCATGTTAAAGTCGCCTGCGTTTCGGATGAAGTACGACAATTTTTTATTGAGCATGCCGGTTGTGGGCCGCGTGAG TAAGGGCTTAAATACGGCACGTTTTGCGCGAACCTTAAGTATCTTATCCGCAAGCTCTGTGCCTTTGCTCGACGGTATGC GTATCGCCAGTGAAGTGTTGCAGAATGTGCGAGTGCGGGCTGCAGTGGATGATGCGACTGCGCGGGTGCGTGAAGGAACT AGCCTAGGTGCGGCATTGACTAATACTAAGTTGTTTCCGGCAATGATGTTATACATGATTGCCTCGGGCGAAAAGAGTGG TCAGCTTGAGCAAATGTTAGAACGCGCCGCCGATAACCAAGACAGGGAATTCGAGGGCAACGTCAATATAGCGTTAGGGG TATTTGAACCTATGCTGGTGGTGAGTATGGCGTGTGTGGTGCTGTTTATCGTGATGGCGATTCTGCAGCCAATCTTAGCC TTGAATAACTTGATTAGCGGTTAA Protein sequence : MPAFEYKALDAKGKQLKGVIEADTARHARSQLRDQRMMPLEILPVSEKEAKAKSSSFSFFKRGISVAELALITRQIATLV AAGLPIEESLKAVGQQCEKDRLASMIMAVRSRVVEGYSLADSLAEFPHIFDDLYRAMVASGEKSGHLEVVLNRLADYTER RQQLKSKLTQAMIYPAVLTTVAIGVISILLAAVVPKVVGQFEHMGAELPASTRFLISASDFVQNYGVFVVIALVMLFALF RRMLKSPAFRMKYDNFLLSMPVVGRVSKGLNTARFARTLSILSASSVPLLDGMRIASEVLQNVRVRAAVDDATARVREGT SLGAALTNTKLFPAMMLYMIASGEKSGQLEQMLERAADNQDREFEGNVNIALGVFEPMLVVSMACVVLFIVMAILQPILA LNNLISG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-97 | 57 |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 5e-98 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal195_0155 | YP_001552597.1 | general secretion pathway protein F | VFG2049 | Protein | 6e-95 | 56 |
| Sbal195_0155 | YP_001552597.1 | general secretion pathway protein F | VFG0181 | Protein | 2e-87 | 49 |
| Sbal195_0155 | YP_001552597.1 | general secretion pathway protein F | VFG1870 | Protein | 1e-80 | 43 |
