Gene Information

Name : rdgC (Sbal195_1401)
Accession : YP_001553835.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 1679216 - 1680130 bp
Length : 915 bp
Strand : -
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTTAAAAATCTTACTCTTTATCGTTTCAATAAACCTTTTGCCGTCGAAACCGAAGCGCTAGAAACTGCGTTGGC
CGATTTCACTTTCTCTCCGTGCTCAAGCCAAGATGTCAGTAAATTTGGTTTCTCAAATGCGTTAGGCAAAAAAGGCAGCT
CCTTGGTACACAGTGCCGACAATCGCCATCTGATCTGTGTAACTAAAGAAGAGAAAATTCTCCCAGGCCAAGTCATCAAA
GAAGCCTTAGAAGAAAAAGTTGCCCTCATTGAAGATGAAGAAAATCGTAAGATGGCGAAAAAAGAAAAAGATGCGCTAAA
AGATGAAATCATTACTAGCTTACTGCCACGCGCTTTTTCACGCCGCAGCCAAACCCATGCCTTGATTTTGCCAGAGCTGG
AAATGATCCTTGTCGACAGTTCAAGTGCCACTAAAACCGAAGAGCTGTTAGCATTATTACGTAAAGCGCTCGGTAGTTTG
CCGGTGATCCCATTGAGCTTTAAAGCGCCAGTCGAATCCAATTTAACCGAATGGTTAAAACTTGGCAGCGCGCCATTACC
TTTTGAAATGCAAGATGAAGCTGAACTTAAATCCGAAGCAGATGAAGGCGGCATTGTACGTTTCAAGCAACAGGATTTAA
AAGAAGACGAAGTCTTAGCTCACCTCGCAACAGGCAAGCAAGTACACAAGTTAGCACTGCATTTCGGCCAGTCGATTGCA
CTATTATTGCAATCGGATGCCAGCGTAAAACGTCTTAAATTCTCTGAAGAATTTAGAGCGGGTAACGATGAAGTGGGCAC
AGACGACCCTATGGCACGTTTAGATGCCGACTTTGCCTTAATGGGCAGCGAGTTAGTCGCCTTGATGCATGCACTCGTGG
CAGCACTAGGTGGGCTCGAAGAAGCACAAGTTTAA

Protein sequence :
MWFKNLTLYRFNKPFAVETEALETALADFTFSPCSSQDVSKFGFSNALGKKGSSLVHSADNRHLICVTKEEKILPGQVIK
EALEEKVALIEDEENRKMAKKEKDALKDEIITSLLPRAFSRRSQTHALILPELEMILVDSSSATKTEELLALLRKALGSL
PVIPLSFKAPVESNLTEWLKLGSAPLPFEMQDEAELKSEADEGGIVRFKQQDLKEDEVLAHLATGKQVHKLALHFGQSIA
LLLQSDASVKRLKFSEEFRAGNDEVGTDDPMARLDADFALMGSELVALMHALVAALGGLEEAQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 1e-51 43