Gene Information

Name : rplS (Sbal195_1290)
Accession : YP_001553725.1
Strain : Shewanella baltica OS195
Genome accession: NC_009997
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 1527280 - 1527633 bp
Length : 354 bp
Strand : +
Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site

DNA sequence :
ATGAACAACATCATTAAAATGCTCAACGATGAGCAAATGAAACAAGACGTACCTGCGTTTGGTGCTGGTGATACAGTAGT
AGTTCAGGTTCGTGTTAAAGAAGGCGATAAAGAGCGTTTACAGGCTTTTGAAGGCGTTGTAATTGCTAAGCGTAACCGTG
GTCTGCATTCTGCATTCACAGTACGTAAAATCTCTAATGGCGAAGGTGTTGAGCGTGCTTTCCAAACGCACAGCCCACTG
ATCGCTAGCATTGAAGTTAAGCGTCGTGGTCGCGTTCGTCGCGCCAAACTGTACTATCTGCGTGATCGTTCAGGTAAATC
TGCACGTATCCGTGAGAAGCTGGCAACTAAGTAA

Protein sequence :
MNNIIKMLNDEQMKQDVPAFGAGDTVVVQVRVKEGDKERLQAFEGVVIAKRNRGLHSAFTVRKISNGEGVERAFQTHSPL
IASIEVKRRGRVRRAKLYYLRDRSGKSARIREKLATK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 7e-39 75
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 9e-28 59