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Name : clpC (P9211_10981) Accession : YP_001550983.1 Strain : Prochlorococcus marinus MIT 9211 Genome accession: NC_009976 Putative virulence/resistance : Virulence Product : ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.92 Position : 999004 - 1001583 bp Length : 2580 bp Strand : + Note : COG542 ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones] DNA sequence : ATGTTCGAGAGGTTTACCGAAAAGGCCATCAAGGTGATAATGCTGGCCCAAGAGGAAGCAAGACGCCTTGGTCACAACTT TGTTGGAACAGAACAAATACTTTTAGGCCTAATAGGGGAAGGCACTGGAGTTGCTGCAAAAGTCCTAAAATCAGTGGGTG TAAATCTTAAGGATTCAAGAGTAGAAGTTGAAAAAATTATTGGCCGAGGGTCTGGCTTTGTTGCTGTTGAGATTCCTTTT ACCCCTCGAGCAAAAAGGGTTCTAGAACTCTCATTAGAAGAAGCAAGACAACTTGGTCACAACTACATAGGCACAGAACA TCTTCTATTGGGTCTTATCAGAGAAGGGGAAGGAGTTGCTGCGAGAGTATTAGAGAACCTAGGTGTGGATCTGACGAAAG TAAGGACACAAGTTATAAGAATGCTTGGAGAGACTGCAGAGGTAACTTCTGGCGGCGGCGGCGGCGGCGGCAAGGGGTCT TTAAAAACAGCCACGCTGGATGAATTTGGAACAAACTTAACCAAATTAGCTAGCGAGTCAAAATTGGACCCAGTCGTTGG CAGGTATGAAGAAATAGATAGAGTTATTCAGATACTTGGCAGAAGGACAAAAAACAACCCAGTTCTTATAGGTGAGCCAG GTGTAGGAAAAACTGCAATAGCTGAGGGATTGGCTCAACGAATTCAACAAGGAGATATTCCTGACATTTTGGAAGAGAAA AGGGTCCTAACCTTAGATATAGGTTTGCTTGTAGCTGGTACTAAGTATCGAGGCGAATTCGAGGAAAGGTTAAAGAAAAT AATGGAAGAAATTAAATCTGCTGGGAATGTAATTCTTGTGATTGATGAAGTGCATACTTTAATTGGAGCTGGTGCTGCTG AAGGGGCAATTGATGCAGCAAATATCCTTAAACCTGCTTTGGCCAGGGGAGAACTGCAATGCATTGGGGCTACAACACTT GATGAATATCGAAAACATATTGAACGAGATGCTGCTTTAGAGAGGAGGTTCCAACCAGTCATGATTGGAGAGCCTTCCAT AGAAGACACAATTGAAATACTTAAAGGGCTAAGAGAAAGATATGAGCAACATCACAGACTAAAAATTACTGATCAGGCCT TAGAAGCCGCCGCAAATCTTGGAGATCGCTATATCTCTGACAGATTTCTTCCTGACAAAGCTATTGACCTTATAGATGAA GCAGGCAGTAGAGTCAGATTATTGAATTCCAAATTACCTCCTGAAGCGAAGGAAGTTGACAAACAATTACGCAAAGTTCA AAAAGAAAAAGAAGAAGCAGTAAGAGACCAGAACTTTACAGAAGCAGGTGAATTAAGAGAAAAAGAAGTAAACCTAAAAA ATCAAATTGCCTCGATATTAAATACTACAAAAGATAAAACCACTTTAAATGAAGGTGAAAAAGATAGTCAGCCTGACGCA TCAGCTGAAGATAAAAAGGATAATAAAGAAAATATTTCACAAGAAATCAAAGGTGTCAATAGATCCCCAATTGTTAACGA AGAGGATATTGCTCATATTGTTGCTTCATGGACAGGTGTTCCTGTTCAAAAACTAACAGAAAGTGAATCAGTAAAACTTC TAAATATGGAGGATACACTTCATCAAAGGTTAATTGGTCAAGATGAAGCAGTTAAGGCCGTTTCGAAAGCAATTAGACGG GCAAGAGTTGGTCTCAAAAATCCAAATAGGCCTATAGCAAGTTTTATCTTTTCAGGACCTACTGGTGTTGGCAAAACAGA ATTAACCAAGGCACTAGCTGCATATTTCTTCGGCAGCGAAGAAGCGATGATTCGACTAGACATGTCTGAATTTATGGAAA GACATACCGTCAGCAAACTAATTGGATCTCCACCTGGATATGTTGGTTTCAATGAAGGCGGACAACTAACTGAAGCAGTT AGAAGAAGGCCATACACAGTCGTTCTTTTTGATGAAATAGAGAAATCGCACCCTGATGTATTTAATCTGCTACTTCAACT TTTAGAAGAAGGTCGACTAACAGATTCAAAAGGAAGAACAGTTGATTTCAAAAACACATTAATAATAATGACATCTAACA TAGGATCTAAAGTTATAGAGAAAGGAGGTGGCGGACTAGGGTTTGAATTCTCTGGTGAGAGCATCGAAGATAGTCAGTAC AATAGAATTAAATCCCTCGTAAATGAAGAACTAAAGCAATATTTCAGGCCGGAATTCCTCAACAGGTTAGACGAGATAAT AGTATTCCGTCAGCTATCTAGAGATGAAGTTAAAGACATTGCAGAAATTATGCTAAATGAAGTATTCCTAAGAATTAAAG ATAAAGGCATAACACTATCAGTCACAGAAGCTTTCAAAGAAAGACTTGTAGAAGAAGGCTATAACCCTTCTTATGGAGCA AGACCTTTAAGGAGAGCAGTAATGCGACTCCTAGAAGACAGCTTGGCGGAAGAAGTTCTTTCAGGAAGGATTAAAGATGG AGACAAAGCAGAAGTAGATATCGATGAGAACAAGAAAGTTGTGGTTAAACACATTAACAAAGGTGCGACAAATTTAGAAC TAGCCGGTGCAGGAGTATAA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSVGVNLKDSRVEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLTKVRTQVIRMLGETAEVTSGGGGGGGKGS LKTATLDEFGTNLTKLASESKLDPVVGRYEEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIQQGDIPDILEEK RVLTLDIGLLVAGTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL DEYRKHIERDAALERRFQPVMIGEPSIEDTIEILKGLRERYEQHHRLKITDQALEAAANLGDRYISDRFLPDKAIDLIDE AGSRVRLLNSKLPPEAKEVDKQLRKVQKEKEEAVRDQNFTEAGELREKEVNLKNQIASILNTTKDKTTLNEGEKDSQPDA SAEDKKDNKENISQEIKGVNRSPIVNEEDIAHIVASWTGVPVQKLTESESVKLLNMEDTLHQRLIGQDEAVKAVSKAIRR ARVGLKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAV RRRPYTVVLFDEIEKSHPDVFNLLLQLLEEGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFSGESIEDSQY NRIKSLVNEELKQYFRPEFLNRLDEIIVFRQLSRDEVKDIAEIMLNEVFLRIKDKGITLSVTEAFKERLVEEGYNPSYGA RPLRRAVMRLLEDSLAEEVLSGRIKDGDKAEVDIDENKKVVVKHINKGATNLELAGAGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001550983.1 | ClpC | VFG0079 | Protein | 0.0 | 56 |
| clpC | YP_001550983.1 | ClpC | VFG0080 | Protein | 7e-142 | 49 |
