Gene Information

Name : P9211_10471 (P9211_10471)
Accession : YP_001550932.1
Strain : Prochlorococcus marinus MIT 9211
Genome accession: NC_009976
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 941555 - 942424 bp
Length : 870 bp
Strand : -
Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]

DNA sequence :
ATGAGTGAATTGTTTGTTTCTATTTCCCCTTCTTCTTTACTACTAGAACCACTGACCCATGAATTCATGAGGAAAGCTCT
CATGGTTAGCGCTTTGGTTGGTGGTGTTTGCGGGCTACTTTCTTGCTATATGACTCTTAAAGGCTGGGCTTTAATGGGCG
ATGCTGTTTCTCATGCGGTAATGCCTGGAGTTGTTGTTGCTTATGCACTAGGCCTTCCGTTCTCTTTAGGTGCTTTCGTT
TTTGGAGTAGGCTCTGTGGCTTTGATTGGCTTTGTTAAACAAAAGTCTAGAGTCAAGGAAGATACTGTTATTGGCCTTGT
TTTTACAGGATTTTTTGCTTTAGGACTTGTTCTGGTCTCTAAGATAAAAAGTAATATTGACTTAATGCACATCCTGTTTG
GTAGTCCCTTAGGTATATCTAACTCAGATGTGACTCAGACAATCATAATTTCATTTCTAGTTGTCGCTATATTATTAATA
TTTAGACGAGATTTAATGTTGTACTGTTTTGATGCAACTCATGCTAGATCTATTGGTATTAATACTGGTTTGCTACATTA
TTTATTGTTATCAGTTTTATCATTGGCTGCTGTTGCTGGACTCCAGACTGTTGGCATAATTTTAGTTGTTGCCATGCTAA
TTACTCCTGGTGCAACTGCATACTTGTTGACAGATAGGTTTGACCGCATGACACTTCTAGCTGTTATAAGTAGCTCAATA
TCTAGTATATTAGGAGTATATATAAGTTACTGGTCTGATATAGAAACGGGAGGGTCGATTGTACTTGTACAAACTTTGAT
ATTCTTAATAGCTTTTTTATTTGCACCTAGGTATGGAATTATCAAATATAAGAATTTAAGCTCTAGATAG

Protein sequence :
MSELFVSISPSSLLLEPLTHEFMRKALMVSALVGGVCGLLSCYMTLKGWALMGDAVSHAVMPGVVVAYALGLPFSLGAFV
FGVGSVALIGFVKQKSRVKEDTVIGLVFTGFFALGLVLVSKIKSNIDLMHILFGSPLGISNSDVTQTIIISFLVVAILLI
FRRDLMLYCFDATHARSIGINTGLLHYLLLSVLSLAAVAGLQTVGIILVVAMLITPGATAYLLTDRFDRMTLLAVISSSI
SSILGVYISYWSDIETGGSIVLVQTLIFLIAFLFAPRYGIIKYKNLSSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-52 50
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-52 50
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-52 50
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-52 50
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-52 50
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-43 48
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-43 48
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-43 48
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-43 48
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-43 48
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 2e-40 44
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 1e-40 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P9211_10471 YP_001550932.1 ABC transporter BAC0351 Protein 6e-53 50
P9211_10471 YP_001550932.1 ABC transporter BAC0441 Protein 3e-47 48
P9211_10471 YP_001550932.1 ABC transporter BAC0442 Protein 4e-51 48
P9211_10471 YP_001550932.1 ABC transporter BAC0352 Protein 1e-43 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P9211_10471 YP_001550932.1 ABC transporter VFG0527 Protein 6e-53 50
P9211_10471 YP_001550932.1 ABC transporter VFG0528 Protein 1e-43 48