Gene Information

Name : MmarC6_0369 (MmarC6_0369)
Accession : YP_001548422.1
Strain : Methanococcus maripaludis C6
Genome accession: NC_009975
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 329977 - 330681 bp
Length : 705 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mvn:Mevan_1678 ABC transporter related

DNA sequence :
ATGTACAAAATTATAAGTCTTGAAGATGTTTGGAAAATCTACCAGATGGGCGAAGTTGAAGTTCAGGCCTTGAAGGGAGT
TTCACTCGATATAAATAAAGGTGATTTTGTCGCAATTGTTGGGTCATCAGGTTCTGGAAAATCGACCATGATGAATATGA
TAGGATGCCTTGATGTACCGACAAAAGGTAGTGTTTACCTTAAATCAAAAAATATCTCTGATATGACTGAATCAGAACTA
TCTGAACTTCGTGGAAAAACAATCGGTTTTGTGTTTCAGCAATACAATTTAATTCCAAACATGACTGCACTTGAAAACGT
ACTTTTATCACTGCAAATACAGGAAGTCAATGATTCTACTGCAGATCGAGCTGCAAAAAGAGCATTGAAACAGGTTGGCC
TAGAAGACAGGATGAACAATAAACCGTCCCAGCTTTCTGGAGGTCAGCAACAGCGAGTATCAATCGCAAGAGCGTTAGCA
TGTGAACCAGAAATAATTCTTGCAGACGAACCAACAGGGGCGCTCGACAGTGCGACAGGTAAAGAAATTATAAAATTATT
TATGGCCCTCTGGGAAAGTGGGAAAACCATTATTATGATTACGCATGACCCGAATCTTGCAAAATATGCAAAGACCATTG
TTGAATTAAAAGACGGAAATATCATCAGTATATCAGATAACAAACAAAATACAATTCATGAGTGA

Protein sequence :
MYKIISLEDVWKIYQMGEVEVQALKGVSLDINKGDFVAIVGSSGSGKSTMMNMIGCLDVPTKGSVYLKSKNISDMTESEL
SELRGKTIGFVFQQYNLIPNMTALENVLLSLQIQEVNDSTADRAAKRALKQVGLEDRMNNKPSQLSGGQQQRVSIARALA
CEPEIILADEPTGALDSATGKEIIKLFMALWESGKTIIMITHDPNLAKYAKTIVELKDGNIISISDNKQNTIHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 4e-34 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MmarC6_0369 YP_001548422.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-52 50
MmarC6_0369 YP_001548422.1 ABC transporter-like protein CP001581.1.gene598.p Protein 7e-43 45
MmarC6_0369 YP_001548422.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-42 44
MmarC6_0369 YP_001548422.1 ABC transporter-like protein CP001581.1.gene798.p Protein 4e-43 43
MmarC6_0369 YP_001548422.1 ABC transporter-like protein NC_012469.1.7685735. Protein 3e-37 42