Gene Information

Name : MmarC6_0254 (MmarC6_0254)
Accession : YP_001548307.1
Strain : Methanococcus maripaludis C6
Genome accession: NC_009975
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 233487 - 234212 bp
Length : 726 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mvn:Mevan_1563 ABC transporter related

DNA sequence :
ATGGCTTTAATTGAAACAAAGAATGTAATCAAGACTTACGGTATTGACGAAGCTAAATCAAATGTATTAAAGGGCATTAA
TTTAAAAATTGAGGAAGGAGAATTTGTAATGATAATGGGCCCGAGTGGTTGTGGAAAATCCACGTTAATGAATATTTTGG
GTCTTTTAGATGTTCCTTCAAAAGGTGATGTTTACATAAGGGGCAAAAAAACCACTAAAATGAATGAAAACGAACGTGCA
GTATTTAGAAGAAAAATTAGTGGATTTATATTCCAGCAATTTCATTTAATTGGAACATTAACGGCGTTAGGAAATGTTGA
ACTTCCAATGACTTTGGATGGAAAAGATGAATATTCGAGAAAAAAACGGGCCAAGGAATTATTAAGTATCGTGGGCCTAA
CTGAGCGAGAAAGTTATAAGCCATCACAGCTTTCTGGTGGCCAACAGCAAAGAGTTGCAATTGCAAGATCTCTCTCAAAT
AATCCAAAAGTACTCTTTGCAGACGAACCTACTGGAAATCTCGATAGTAAAAGTGGTAAACAGGTAATGGAAATCCTCGA
AAATTTACATTCGGAAGGAATGACGGTTATAATGGTTACACATGACAATTACATGATAAAATATGCTACAAAGGTCATCA
GGATGAAAGATGGTGAAATTCTCGAAATTGATCGGGTTAAAGATGGCGAAGTTTTAGAAACAGAAGTTATTAAAAAAGGG
GCATAG

Protein sequence :
MALIETKNVIKTYGIDEAKSNVLKGINLKIEEGEFVMIMGPSGCGKSTLMNILGLLDVPSKGDVYIRGKKTTKMNENERA
VFRRKISGFIFQQFHLIGTLTALGNVELPMTLDGKDEYSRKKRAKELLSIVGLTERESYKPSQLSGGQQQRVAIARSLSN
NPKVLFADEPTGNLDSKSGKQVMEILENLHSEGMTVIMVTHDNYMIKYATKVIRMKDGEILEIDRVKDGEVLETEVIKKG
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-38 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MmarC6_0254 YP_001548307.1 ABC transporter-like protein NC_012469.1.7686878. Protein 5e-50 51
MmarC6_0254 YP_001548307.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-39 45
MmarC6_0254 YP_001548307.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-42 44
MmarC6_0254 YP_001548307.1 ABC transporter-like protein CP001581.1.gene598.p Protein 3e-39 42
MmarC6_0254 YP_001548307.1 ABC transporter-like protein NC_012469.1.7685735. Protein 4e-38 41