Gene Information

Name : MmarC6_1788 (MmarC6_1788)
Accession : YP_001549831.1
Strain : Methanococcus maripaludis C6
Genome accession: NC_009975
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline ABC transporter ATPase subunit
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 1679066 - 1680235 bp
Length : 1170 bp
Strand : +
Note : KEGG: mvn:Mevan_0052 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGAATGACCCCATAATTCAGGTAACACAATTATACAAAATATTCGGTAAAAAACCAGAAAAAGCCTACCCGTTAATTAA
AGAAGGCTTTTCACGAAAAGAAATAAAGGAAAAAACAAAACAGGTTGTTGGACTTAAAAATATCAATTTTGACGTTAAAA
AAGGAGAAATTTTTGTAATTATGGGACTTTCGGGAAGCGGTAAATCCACACTGATAAGGTGTATCAACAGGCTCATAAAA
CCAACCTATGGAAATATAATTCTTGAAAATGGCGTTGATATATCAAAAATGCGCGAAAAAGACCTCCTTGAAATTAGAAG
AAAGTATTTTGGAATGGTATTTCAGAAATTTGGACTTTTACCAAACCGTTCAGTTTTAGAAAACGTGGCCCTAGGCCTTG
AAATTCAAGGGGTAACTCTTGAAGAAAGATTTGAAAAGTCAGAAAAGGCGCTTTCCCTTGTTGGACTTAAAGGCTGGGAA
AAAAGTAAAATTTCAGAACTTAGTGGTGGTATGCAGCAGCGTGTTGGTCTTGCAAGGGGTCTTGCAGTAAATCCTGAAAT
ATTATTGATGGATGAACCATTCAGTGCACTTGACCCGCTAATACGGCTTGAAATGCAGGAATTTCTTTTAAAAATTCAGA
AAAAGATGAAAAAAACGATTATTTTCATAACTCATGATTTGAACGAAGCAATAAAACTTGGCGACAGGATTATGATTTTA
AATGAAGAAGGAAGTCTTGTTCAGTTGTCACACCCTGAAGAAATTCTTTTAAATCCTCAGAACGATTTTGTTGAATCATT
TGTAAAAGAAGTTGATAAAACAACAGTAATTCGAGCTGAATCACTCGTTAAAAAACCAGAATTTACACTCAATACACGAA
TGGAAAAAGAACACGCGGTTAAAATTTTAGACGATTTGAGCCTTGAATATGCATACGTACTAGATGATTCTGGAAAATAC
GTTGGAATCGTAAACAAAGAAGAACTTCAAAATTCGGAACAAATTATCAATTGTATTCAAAAAATCAAACCACTGGAAGA
TGTAAAAACCATAAATCAAGGACTACCACAATTCATTTCTTCAGATTACCCTGTTCCAGTAGTTGACGATGAAAATAACT
TTTTAGGATACGTTGAATTTGAAGAAGTAATTAACCTGATAAAAAATTAA

Protein sequence :
MNDPIIQVTQLYKIFGKKPEKAYPLIKEGFSRKEIKEKTKQVVGLKNINFDVKKGEIFVIMGLSGSGKSTLIRCINRLIK
PTYGNIILENGVDISKMREKDLLEIRRKYFGMVFQKFGLLPNRSVLENVALGLEIQGVTLEERFEKSEKALSLVGLKGWE
KSKISELSGGMQQRVGLARGLAVNPEILLMDEPFSALDPLIRLEMQEFLLKIQKKMKKTIIFITHDLNEAIKLGDRIMIL
NEEGSLVQLSHPEEILLNPQNDFVESFVKEVDKTTVIRAESLVKKPEFTLNTRMEKEHAVKILDDLSLEYAYVLDDSGKY
VGIVNKEELQNSEQIINCIQKIKPLEDVKTINQGLPQFISSDYPVPVVDDENNFLGYVEFEEVINLIKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 3e-69 46