Gene Information

Name : MmarC6_1622 (MmarC6_1622)
Accession : YP_001549666.1
Strain : Methanococcus maripaludis C6
Genome accession: NC_009975
Putative virulence/resistance : Unknown
Product : rRNA large subunit methyltransferase
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 1515451 - 1515930 bp
Length : 480 bp
Strand : -
Note : SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA

DNA sequence :
ATGAATATAACGATTATTTCTGTTGGAAAAATAAAAGAAAAATACCTAAGTGGTGCAATTATCGAATACTCGAAAAGAAT
TTCAAGGTATTCAAAACTCGATATAATCGAAGTTGCGGATGAAAAAACTCCTGAAAATCCAAGCGATGTTGAAAAATCAA
AACTACTAGAAAAAGAAGCTGAACGAATTTTAAAATATCTAAAAAAAGATTCTTTTGTAATAACTCTTGAAATTTTGGGA
AAAGAATTAACTTCTGAGAGTCTTGCAAAAAAAATAAATGATCTTTCAATTTCTGGAAAAAGCGATATAACATTTATTAT
CGGCGGATCTTTGGGGTTATCCAGAAATATCTCGGAAATTTCAGATTTTAAACTGTCTTTTTCAAAAATGACGTTTCCCC
ACCAATTGATGAGGGTAATTCTTTTAGAACAGATCTACCGAAGTTTTAGAATCATTAATGGAGAACCATACCACAAATAA

Protein sequence :
MNITIISVGKIKEKYLSGAIIEYSKRISRYSKLDIIEVADEKTPENPSDVEKSKLLEKEAERILKYLKKDSFVITLEILG
KELTSESLAKKINDLSISGKSDITFIIGGSLGLSRNISEISDFKLSFSKMTFPHQLMRVILLEQIYRSFRIINGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 3e-42 62
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 1e-26 58
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 6e-42 58
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 4e-40 58
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 6e-42 58
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 6e-42 58
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 4e-41 58
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 6e-42 58
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 6e-42 58
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-41 58
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 6e-42 58
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 9e-42 58
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 6e-42 58
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 9e-42 58
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 6e-42 58
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 6e-42 58
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 6e-42 58
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 1e-40 57
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 5e-39 56