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Name : MmarC6_1540 (MmarC6_1540) Accession : YP_001549584.1 Strain : Methanococcus maripaludis C6 Genome accession: NC_009975 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1438383 - 1440524 bp Length : 2142 bp Strand : - Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: mvn:Mevan_0450 RNA binding S1 domain protein DNA sequence : ATGGATATTTTTCAAAAATTGCAAAAAGAATTTAATTTAAAAACATTTCAGGTCGAAAATACCGTTAAATTAATTGATGA AGGAAATACAATTCCATTTATTTCAAGATACAGAAAAGAAGCAACAGGTTCACTTGATGACGTTGTTTTGAGGAAATTTT TTGATAGATTGAATTACTTAAGAAATTTAGAAGATAAAAAAGCCCAAACCATAAAATTAATCGATGAACAGGGTAAATTA ACAGGAGAATTAAAACAAAAAATTGAAAAATCTGAACTTTTAACTGAACTTGAAGATATTTACCGTCCATTCAGGCCCAA AAGAAAAACAAGAGCAACCATTGCAGAAAATAAGGGTTTAAAACCACTGTCTGAATTAATTTTAAAACAGCATTTGGAAA AACCAATCGAAGAATTTGCAAAAGAATTCATTAATCTGGAATTAGAAGTTAATTCAGTTGAAGATGCAATTTCTGGTGCC AAAGATATTATTGCAGAAGAAATTTCGGATAATGCAGACTACAGAAAATTTATCCGTGAAACCACGTTTTCAGAAGGAAT TATTGCTGTAAAAGCAAAGAATGTGGATGAAAAGTCAGTTTATGAAATGTATTATGAATATTCTGAAGCGATCAATAAAA TTCCCGGCCACAGAATCCTTGCAATAAATAGGGGCGAATCAGAAAAAGTTTTACAGGTAAAAATCGATGCACCTGTTGAA TTTATTCAAGACGGGATATTTAAAAATATAATTTTAGAAAATTCGGAAACTTCTGAAATTTTAAAAGATACAGTAATTGA CAGCTATAAAAGACTAATTGCACCATCAATTGAAAGAGAAATTAGAAACAGCCTTACTGAAAAGGCTGAAAATGGTGCAA TCGAAGTATTTTCGAAAAACTTGAAGCAGTTGTTATTGCAACCGCCAATAAAAAACAAAACGGTACTTGGATGGGACCCG GCATTTAGAACGGGCTGTAAAATTGCAGTAGTCGATGAAACCGGAAAAGTTCTTGATAAAACGGTTGTGTATCCTACAGA ACCGCATAATAAAATTGCAGAAACTAAAAAACAGGTTAAAGAACTTATTATAAAGCACGATATCGACGTTATCGCTATCG GAAATGGGACTGCTTCGAGAGAATCTGAACATGTTGTTTCTGAAATTTTAAAAGAAGTTGTAAAAGACGTCTACTACGTA ATTGTAAATGAAGCAGGAGCTTCTGTTTATTCTGCATCTGAACTTGGATCTGACGAATTTCCAGAATACGATGTTGGAAT TAGAAGTGCAATATCTATTGCAAGAAGGCTTCAGGATCCCTTAGCAGAACTTGTAAAAATCGACCCAAAATCAATTGGTG TTGGCCAGTACCAGCACGATATGAACCAAAAAAAGTTATCTGAAAGTTTAGGTGCTGTTGTTGAATCTTCCGTAAACTCT GTTGGAGTTGATCTAAATACTGCATCGGTTTCGCTTTTAAATTACGTATCTGGAATTAATATGGGAATTGCAAAAAATAT TGTAGCATACCGAACTGAAAATGGAAAATTCGAATCCCGAAAAGAGCTTTTAAAAGTAAACAAACTTGGTAAGAAAGCAT TTGAACAGTGTGCAGGGTTTTTGAGAATTCCTGAAGGTAAAAATTTATTTGACAATACTGGCGTTCACCCCGAATCATAC AAAATTGCAGAAAATTTACTCAATGAGCTAAATATCTCGATAAAAGATATTAAAGAGAAAAAAATCGATAAAATTTCTGA AAAGGTCGATATTGAAAAATTGGCTGAAAAATTGGATTGCGGAATCCCAACACTTGAAGATATAATAAAAGAACTTGAAA AACCTGGAAGAGACCCAAGAGAAGACCTTCCAAAACCAGTTTTAAGAAGCGATGTTTTAGAACTTGAGGATTTAAAAGAA GGAATGATATTAAAAGGAACTGTAAGAAATATTGTTGACTTCGGAGCTTTTATTGATATTGGAGTTCACCACGATGGATT GGCACATATTTCTGAAATTGCTGACAGATTCATAAAACATCCCCTTGATGTAATCTCTGTTGGGGATATCGTAGATGTCA TGGTAATGGACATTGATTTTGATAAAAAGAGAGTTTCACTTTCAATAAAACGTGCAAAATAA Protein sequence : MDIFQKLQKEFNLKTFQVENTVKLIDEGNTIPFISRYRKEATGSLDDVVLRKFFDRLNYLRNLEDKKAQTIKLIDEQGKL TGELKQKIEKSELLTELEDIYRPFRPKRKTRATIAENKGLKPLSELILKQHLEKPIEEFAKEFINLELEVNSVEDAISGA KDIIAEEISDNADYRKFIRETTFSEGIIAVKAKNVDEKSVYEMYYEYSEAINKIPGHRILAINRGESEKVLQVKIDAPVE FIQDGIFKNIILENSETSEILKDTVIDSYKRLIAPSIEREIRNSLTEKAENGAIEVFSKNLKQLLLQPPIKNKTVLGWDP AFRTGCKIAVVDETGKVLDKTVVYPTEPHNKIAETKKQVKELIIKHDIDVIAIGNGTASRESEHVVSEILKEVVKDVYYV IVNEAGASVYSASELGSDEFPEYDVGIRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDMNQKKLSESLGAVVESSVNS VGVDLNTASVSLLNYVSGINMGIAKNIVAYRTENGKFESRKELLKVNKLGKKAFEQCAGFLRIPEGKNLFDNTGVHPESY KIAENLLNELNISIKDIKEKKIDKISEKVDIEKLAEKLDCGIPTLEDIIKELEKPGRDPREDLPKPVLRSDVLELEDLKE GMILKGTVRNIVDFGAFIDIGVHHDGLAHISEIADRFIKHPLDVISVGDIVDVMVMDIDFDKKRVSLSIKRAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-140 | 45 |
