Gene Information

Name : MmarC6_1318 (MmarC6_1318)
Accession : YP_001549363.1
Strain : Methanococcus maripaludis C6
Genome accession: NC_009975
Putative virulence/resistance : Resistance
Product : hexapaptide repeat-containing transferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 1226516 - 1227196 bp
Length : 681 bp
Strand : -
Note : PFAM: transferase hexapeptide repeat containing protein; KEGG: mvn:Mevan_0665 transferase hexapeptide repeat protein

DNA sequence : 
TTGAATTCGAATCCATTTGAAACTTATAGGGATATTAGAATAATGAACGAAAACCCCAAATACCCTGTAAAAGGGGATGG
AATAGTTCGAGAAAAAATAAAAAGTGAAAACGTCGAAATTGACGAATATACCTATTATTCAGGATATTACGAAGGAAAAG
AGTTTAAAGACTGCATAATGTATCTTGATGAAATCGACAATTGCAAAGACATGGATAAATTAGTTATTGGTAAATTCTGC
AGCATTGCGTCAGGCGTTAAATTTATAATGGGCGGAAATCAGGGCCACAGATACGACTGGATTTCTACATACCCATTAAC
TTTGATTTCAGAAACTCCTGAAGATTTAAAATCCGAAAATGGAAAAGGATATTTAAAAAAAGGAGATACCGTACTTGAAA
ATGATGTATGGATCGGTGCAAACGTAACCATTATGCCCGGCGTTAAAATTGGCAGCGGTGCAGTAATTGCAACAGGAAGC
GTTGTTACAAAAAATGTAGAACCATATACGATAGTTGGTGGAAATCCTGCAAAAATAATTAAAAAAAGATTTTCTGACGA
AAAAATTGAACTTCTTTTGAAAATAAAATGGTGGAACTGGCCAATTGAAAAAATTAAAGCAAACATCAAGACTTTAATGA
GCGATGACTTTGAAGAATTAAAAAAGATTTGTGAAGAATAA

Protein sequence : 
MNSNPFETYRDIRIMNENPKYPVKGDGIVREKIKSENVEIDEYTYYSGYYEGKEFKDCIMYLDEIDNCKDMDKLVIGKFC
SIASGVKFIMGGNQGHRYDWISTYPLTLISETPEDLKSENGKGYLKKGDTVLENDVWIGANVTIMPGVKIGSGAVIATGS
VVTKNVEPYTIVGGNPAKIIKKRFSDEKIELLLKIKWWNWPIEKIKANIKTLMSDDFEELKKICEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 5e-42 54
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 5e-42 54
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 2e-41 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MmarC6_1318 YP_001549363.1 hexapaptide repeat-containing transferase AF322577.2.gene4.p01 Protein 3e-42 54
MmarC6_1318 YP_001549363.1 hexapaptide repeat-containing transferase AY740681.1.gene5.p01 Protein 3e-42 54
MmarC6_1318 YP_001549363.1 hexapaptide repeat-containing transferase JF268688.1.gene6.p01 Protein 8e-39 54
MmarC6_1318 YP_001549363.1 hexapaptide repeat-containing transferase AY123251.gene2.p01 Protein 8e-42 52
MmarC6_1318 YP_001549363.1 hexapaptide repeat-containing transferase NC_002516.2.878374.p Protein 2e-39 50
MmarC6_1318 YP_001549363.1 hexapaptide repeat-containing transferase CP001581.1.gene990.p Protein 1e-42 49
MmarC6_1318 YP_001549363.1 hexapaptide repeat-containing transferase AM180355.1.gene2499. Protein 2e-34 45
MmarC6_1318 YP_001549363.1 hexapaptide repeat-containing transferase NC_011595.7057349.p0 Protein 2e-28 45
MmarC6_1318 YP_001549363.1 hexapaptide repeat-containing transferase NC_010410.6000796.p0 Protein 2e-28 45
MmarC6_1318 YP_001549363.1 hexapaptide repeat-containing transferase NC_011586.7045146.p0 Protein 3e-28 45