Gene Information

Name : Haur_0506 (Haur_0506)
Accession : YP_001543285.1
Strain : Herpetosiphon aurantiacus DSM 785
Genome accession: NC_009972
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 589697 - 590830 bp
Length : 1134 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ava:Ava_4155 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme

DNA sequence :
GTGGATTATGGCTTTGCAACCCGCGCGATTCATGCAGGGCAAGACCCTGAATCAGTAACTGGCGCTGTGATTGTGCCAAT
TTATCAAACTTCGACCTATGCCCAACGCGGAGTTGGCGATCATACTGGCTATGAATATTCACGTACCGATAATCCAACCC
GCACTGCCTTGCAAACGTGTTTAGCCGCTCTGGAAGAGGCCAAACATGCCTTGGTGTTTGCTTCGGGATTGGGGGCTTCA
ACCACCTTGATGCTTATGCTTAAGGCTGGCGATCATGTGATTTGTGGCGATGATGTTTATGGTGGCACCTATCGGCTGTT
CCAACGGGTGATGACTGAGCATGGCCTGAGCTTTGATTTTGTCGATATGGCTGATCCTGAGGCGGTTCGAGCGGCAATCA
AGCCTAATACTCGCTTGATTTGGCTGGAAACCCCAACCAACCCGCTATTAAAGCTCGCGCCGATTGCTGCTATTACCAAA
GTTGCCCGTGAACATGGCATTTGGACGATTGTTGATAACACCTTTGCTTCGCCCTACAACCAACGCCCAATTACCTTAGG
TGCGGATATGGTGCTGCACAGCACAACCAAATATATCGGCGGCCATAGCGATGTGGTTGGCGGGGCGATTATGACCTCGA
ACGATGAGCTGTATGAAAAATTGAAGTTCTTGCAAAATGCCGCTGGCGCTGTACCAGGCCCATTCGATTGCTGGTTGGTC
TTGCGCGGAGTCAAAACTCTGAGCATTCGCATGCGCGAGCACGAACGCAACGCTTTGGCAATTGCTCAATTCCTAACCGA
GCATCCAGCAGTTGAAAAAGTGATTTATCCAGGCTTGCCGTCGCATCCTCAGCACAACTTGGCGCGTGAGCAAATGCGCG
GCTTTGGCGGGATGATCTCAATCTTGCTGAAGGGCGGGGCGGAAGTTGCTAACGCCATGGTCAGCAAAACCAAGCTCTTT
ACCTTAGCTGAAAGCTTGGGCGGGATTGAATCGCTGATTGAAGTGCCAGCTGGCATGACCCATATGAGCGTTGCTGGCTC
GAAACTTGAAGTACCCGCCAATTTAGTGCGGCTTTCGGTTGGAATCGAAGATATTAATGATTTATTGCGCGACCTTGAGC
AAGCACTTGCGTAG

Protein sequence :
MDYGFATRAIHAGQDPESVTGAVIVPIYQTSTYAQRGVGDHTGYEYSRTDNPTRTALQTCLAALEEAKHALVFASGLGAS
TTLMLMLKAGDHVICGDDVYGGTYRLFQRVMTEHGLSFDFVDMADPEAVRAAIKPNTRLIWLETPTNPLLKLAPIAAITK
VAREHGIWTIVDNTFASPYNQRPITLGADMVLHSTTKYIGGHSDVVGGAIMTSNDELYEKLKFLQNAAGAVPGPFDCWLV
LRGVKTLSIRMREHERNALAIAQFLTEHPAVEKVIYPGLPSHPQHNLAREQMRGFGGMISILLKGGAEVANAMVSKTKLF
TLAESLGGIESLIEVPAGMTHMSVAGSKLEVPANLVRLSVGIEDINDLLRDLEQALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-87 48
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-85 47
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-68 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Haur_0506 YP_001543285.1 cystathionine gamma-synthase BAC0207 Protein 2e-70 45