Gene Information

Name : Haur_4974 (Haur_4974)
Accession : YP_001547732.1
Strain : Herpetosiphon aurantiacus DSM 785
Genome accession: NC_009972
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 6310727 - 6313306 bp
Length : 2580 bp
Strand : -
Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rca:Rcas_0920 ATPase AAA-2 domain protein

DNA sequence :
ATGAATTTGAATATTTACACCGAAAAATCACGCGCAGCTATTTTTGATGCCCAAAGCATCGCTTCTCGCAACGGCCAAAG
CGAAATCACACCAGAACACGTTCTTGTGGCCTTGCTCGAACAAGCTGATGGCGTGGTTCCGCAAATTATCACCAAAATGG
ATCGCGATCCGCAGGCCTTAGTTGCTGCGGTTAATGATGAAATTCGCCGTTTGCCCCGAGTGAGTGGCACTCAAATGCAG
CCTGGCATTGGACAACGCTTAGATCAAGTATCTCAAACCGCCGAAAATGAAGCCAAAGGCATGGGCGATGAGTATGTTTC
CACCGAACATCTCTTGCTTGGCCTCGCAAGCGAACGCGCCAAAGGCCCATCGCAACGCTTGCTGACCTCGTTTGGCATTA
CCAAAGATGCGATTCTCAAAACCTTAACTGCCATCCGTGGCAATCAACGGGTCACCGACCAAAATCCCGAGGGTAAATAT
CAAGCGCTCGAAAAGTATGGCCGCGATTTAACGACGTTGGCCCAACGCGGCAAGCTTGATCCAGTCATTGGCCGCGATGA
AGAAATTCGCCGCACGATTCAGGTCCTTTCACGCCGTACCAAAAATAATCCAGTCTTAATTGGTGAGCCAGGCGTTGGTA
AAACTGCGATAGTCGAGGGCTTGGCGGCGCGGATTGTGCGCGGCGATGTGCCCGAAGCACTGCGTAACAAACGTTTGATC
GCGCTCGATTTGGGAGCGCTGGTGGCAGGCGCAAAATTTCGCGGCGAGTTTGAAGAACGGCTCAAAGCTGTGCTCAGCGA
AGTAACCTCGGCTGATGGTCGGGTAATTTTGTTTATCGATGAGTTACATACCGTGGTTGGCGCTGGTGCTGCCGAAGGCT
CGATGGATGCCTCGAATATGCTCAAGCCCGCATTGGCTCGCGGCGAACTGCACACAATCGGGGCAACCACGCTTGATGAA
TATCGCAAATATATTGAGAAAGATCCAGCATTGGAACGCCGTTTCCAACCTGTTTTGGTCGGCGAGCCAAGTGTTGAAGA
TACCATCTCGATTTTGCGCGGCTTGAAAGAACGCTACGAAACCCATCACAACGTGCGAATTACTGATGCAGCGATTGTCG
CCGCCGCAACCTTATCCAATCGCTATATCGCTGATCGCTTCTTGCCCGACAAAGCAATTGACTTAATCGACGAAGCTGCT
GCCAAACTACGCATGGAAATCACCAGCGATCCGGTTGAACTCGATGAGATCAAGCGCAAACGCATGCAATGGGAAATTGA
ACGCGAAGCCTTGAAACGCGAAAAAGATCCTGCCTCCAAGGAGCGCTTGGAGCGGCTCGAACGTGATTTGGCCAACTTGC
GCGAACAACAGGCAGTGCTCGATACCAAACTTTCCAGTGAGCGCGGCGCAATCAATGCTATCGCTCAACTCAAGGAAAAA
ATCGATCAAACCAAGGTGCAAATCGAGCAAGCTCAACGCCAATACGATTATAACCGTGCTGCCGAGTTGCAATATGGCAC
GCTCAACAGCTTAGAGCAACAACTCGGCGAGGCCGAAGCCAAAGTTCGCGATATGCAAGAACATGGTATGTTGCTCAACG
AAGAAGTCTCCGAAGAAGATATTGCTCAAGTTGTCGCCAAATGGACGGGTATTCCGGTTTCCAAGCTGTTGGAAGGCGAA
TTGCAGAAACTGGTCAAGATGGAAGAACGCTTGCATGCCCGCGTGATCGGCCAACACGAAGCGGTCAAAGCCGTTTCCGA
TGCAGTGCGACGTTCACGGGCCGGCTTGCAAGATCCCAATCGACCACTAGGTTCGTTCTTATTCCTTGGGCCAACTGGGG
TTGGTAAAACCGAGTTGGCACGGGCTTTGGCTGAATTTTTGTTCGATGACGAAGCAGCAATGGTGCGGATCGATATGTCG
GAATATATGGAGCGTCATGCCGTGGCACGGCTGATTGGTGCACCTCCAGGTTATGTTGGCTACGAAGAAGGCGGCCAATT
AACCGAGGCTGTGCGCCGTCGCCCCTATAGCGTGGTGCTGTTCGACGAAATTGAAAAAGCCCATCCCGATGTGTTCAACA
CGCTATTGCAATTGCTCGATGATGGTCGCCTGACCGATGGCCAAGGTCGGTTGGTCGATTTCACCAATACCGTGGTGATT
ATGACCTCGAACATCGGCAGTAATCGGATTCAAAGTTTGGTTGATGATGAAGAAGCGATGCGCGAAGCCGTGTTGGAAGA
ATTGCACGACGAGCTACGGCCTGAATTCCTCAACCGGATCGATGATGTGATTATCTTCAAGCCCTTGACTCAAGCTGAAA
TCAAACATATCGTCGATATTCAGGTTGATCGGCTGAGCAAACGCTTGAGCGAACGCAAACTTAAATTGGTGTTGAATGAA
GCGGCCCGTCAGCACTTAGCTCAAGTTGGCTATGACCCAGTGTTCGGCGCACGGCCACTCAAACGCGCCATCCAGAGCGA
GTTGCTCAATCCATTGGCCTTGGAAGTGCTCAAAGGTAAATTCCCAGGTGGCACAACCGTCAATGTTGATGTTAAAAATG
GCAAACTCAGTTTCGACTAA

Protein sequence :
MNLNIYTEKSRAAIFDAQSIASRNGQSEITPEHVLVALLEQADGVVPQIITKMDRDPQALVAAVNDEIRRLPRVSGTQMQ
PGIGQRLDQVSQTAENEAKGMGDEYVSTEHLLLGLASERAKGPSQRLLTSFGITKDAILKTLTAIRGNQRVTDQNPEGKY
QALEKYGRDLTTLAQRGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAARIVRGDVPEALRNKRLI
ALDLGALVAGAKFRGEFEERLKAVLSEVTSADGRVILFIDELHTVVGAGAAEGSMDASNMLKPALARGELHTIGATTLDE
YRKYIEKDPALERRFQPVLVGEPSVEDTISILRGLKERYETHHNVRITDAAIVAAATLSNRYIADRFLPDKAIDLIDEAA
AKLRMEITSDPVELDEIKRKRMQWEIEREALKREKDPASKERLERLERDLANLREQQAVLDTKLSSERGAINAIAQLKEK
IDQTKVQIEQAQRQYDYNRAAELQYGTLNSLEQQLGEAEAKVRDMQEHGMLLNEEVSEEDIAQVVAKWTGIPVSKLLEGE
LQKLVKMEERLHARVIGQHEAVKAVSDAVRRSRAGLQDPNRPLGSFLFLGPTGVGKTELARALAEFLFDDEAAMVRIDMS
EYMERHAVARLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIEKAHPDVFNTLLQLLDDGRLTDGQGRLVDFTNTVVI
MTSNIGSNRIQSLVDDEEAMREAVLEELHDELRPEFLNRIDDVIIFKPLTQAEIKHIVDIQVDRLSKRLSERKLKLVLNE
AARQHLAQVGYDPVFGARPLKRAIQSELLNPLALEVLKGKFPGGTTVNVDVKNGKLSFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 8e-108 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 6e-111 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 5e-111 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Haur_4974 YP_001547732.1 ATPase VFG2084 Protein 9e-112 43