Gene Information

Name : Haur_0487 (Haur_0487)
Accession : YP_001543266.1
Strain : Herpetosiphon aurantiacus DSM 785
Genome accession: NC_009972
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 566338 - 568341 bp
Length : 2004 bp
Strand : +
Note : TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: pna:Pnap_4499 transketolase

DNA sequence :
GTGACTCAAGCACATACACTCGATGAACGGGCCATCAATACAATCCGCATGTTGTCGGTTGATGGTGTGCAAGCGGCTAA
TTCGGGCCACCCAGGTTTACCAATGGGGGCAGCGGCCATGGCTTATGTGCTCTGGACGCGCCACCTCAAACATAATCCGG
CTAATCCAGATTGGGCTGATCGCGACCGCTTTGTGCTGTCGGCGGGCCATGGCTCAATGCTGTTGTATAGTTTGTTGCAT
CTCACGGGCTATGATCTTTCGCTCGATGATTTGAAGAATTTCCGCCAATGGCATAGTAAAACCGCTGGTCACCCAGAATA
TGGTTATGCCGCCGGCATCGAAACCACAACTGGGCCACTTGGCCAAGGATTTGCCACGGGCGTGGGTATGGCGATTGCTG
CCCGTCACTTAGCAGGCACGTTCAATCAGCCTGAACTCGAAATCGTCAAGCATCATATTTATGCGATTGTCTCCGATGGC
GATTTGGAAGAGGGGATTAGCGCCGAAGCTGCTTCGTTGGCAGGTCACCTCAAATTGGGCGAACTTATCTATCTGTATGA
TGATAACGAAATTTCGATTGAAGGCGATACCTCAATTGCCTTTACCGAAGATGTGCCAGCCCGTTTCCGCGCCTATGGCT
GGCATGTCCAAGAGATCGACGGGCTTGATCCTGAGCAAGTTGATGCAGCCTTGCATGCTGCCAAAGCGGTGACCGATCAG
CCATCGTTGATTGTGGCTCACACCGTGATTGGCTTTGGCTCGCCCAATCGGGCTGGCACGGCCAAAGCTCACGGCTCGCC
GCTCGGCCCCGATGAAGTTAAATTGACCAAGGAAGCGCTTGGTTGGCCGCTCGAACCAACCTTCTACATTCCTGAAGAAG
TCTTGGCCCACTTCCGCCAAGCCTTGGATCATGGTGCGGCGGCAGAGCAAGCCTGGAACGAATTGCTCGAACGCTACACG
GCGGCGCATCCTGAAAAAGCTGCTGATTTCAAGCAACGCATGTCGGGTGAATTGCCAGCAGGTTGGGATAGTACCTTGCC
AGTTTGGCCAGCTGATGCCAAAGGCGTGGCAACCCGCAAATCATCAGAAACTGCCTTGAATGCCTTGGCCGAGCAAATTC
CAGCGCTCATTGGCGGCTCAGCTGATTTGGCCGAATCGACCTTTACCTTGATCGAGCATGCTCAATCGTTCCAAGCCGAT
ACGCCGCAAGGCCGCAATATGCACTGGGGGATTCGTGAGCATGCTATGGTTGCTGCCGTCAACGGGATGGCGTTGCATGG
CGGCACGATTCCTTACGGCGCAACCTTCTTGGTTTTCAGCGATTATTGCCGTGCCTCGATTCGCTTGGCAGCCTTGATGG
GCATTCGCACGATTCAAGTCTTTACTCACGATAGCATTGGGGTTGGCGAAGACGGCCCAACCCACCAACCAATCGAACAC
ATTCCATCGTTGCGGATTATCCCCAATTTGAATGTGATGCGGCCTGGTGATGCCAACGAAACCAGCCAAGCTTGGCGCGT
AGCAGTCAGCCATAAAGGCCCAACCTTGCTGGCCTTGACCCGCCAAAACTTACCAACGCTTGATCGCACCCGCTATGCCT
CGGCTGAGGGTGTGGCTCAAGGTGGCTATGTCTTGGCTGATAGCGCTGGTCAACCAGAATTAATCATCATTGCAACTGGC
TCGGAATTGCAACATGCCGTGGCGGCCTACGAGCAATTGAGTGGCGAAGGAGTCAAGGTACGGGTGGTCAGTATGCCATC
AACCTTGCTGTTCGACGCTCAGTCAGTGGAATATCGCGAGAGCGTACTGCCCAAGGCTGTGACCAAACGGATTGCGATTG
AAGCTGCGCATCCCGTGACCTGGTATAAATATGTTGGGACTGAGGGCGATATTATTGGGATTGATCACTTCGGTGCTTCA
GCGCCAATTAATATTTTGATGAAGGAATTTGGCTTTACCGCCGAAAACCTGATTGCTCGTGCCAAGGCCTTGTTGGCCAA
ATAA

Protein sequence :
MTQAHTLDERAINTIRMLSVDGVQAANSGHPGLPMGAAAMAYVLWTRHLKHNPANPDWADRDRFVLSAGHGSMLLYSLLH
LTGYDLSLDDLKNFRQWHSKTAGHPEYGYAAGIETTTGPLGQGFATGVGMAIAARHLAGTFNQPELEIVKHHIYAIVSDG
DLEEGISAEAASLAGHLKLGELIYLYDDNEISIEGDTSIAFTEDVPARFRAYGWHVQEIDGLDPEQVDAALHAAKAVTDQ
PSLIVAHTVIGFGSPNRAGTAKAHGSPLGPDEVKLTKEALGWPLEPTFYIPEEVLAHFRQALDHGAAAEQAWNELLERYT
AAHPEKAADFKQRMSGELPAGWDSTLPVWPADAKGVATRKSSETALNALAEQIPALIGGSADLAESTFTLIEHAQSFQAD
TPQGRNMHWGIREHAMVAAVNGMALHGGTIPYGATFLVFSDYCRASIRLAALMGIRTIQVFTHDSIGVGEDGPTHQPIEH
IPSLRIIPNLNVMRPGDANETSQAWRVAVSHKGPTLLALTRQNLPTLDRTRYASAEGVAQGGYVLADSAGQPELIIIATG
SELQHAVAAYEQLSGEGVKVRVVSMPSTLLFDAQSVEYRESVLPKAVTKRIAIEAAHPVTWYKYVGTEGDIIGIDHFGAS
APINILMKEFGFTAENLIARAKALLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 7e-171 56
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-171 55