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Name : Haur_4342 (Haur_4342) Accession : YP_001547102.1 Strain : Herpetosiphon aurantiacus DSM 785 Genome accession: NC_009972 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 5550589 - 5551857 bp Length : 1269 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATATTCGTTTATTTCGTGAACAACCCGAGTTGGTACGCGAAGGCTTTGCCAAAGTTGGTCGTGATCCAGGTTT AGTCGATCAGGTGATTGGCTTGGATCTTAAACGGCGCGAGGCGATTACCGAAGTTGAGCGGCTCAAGGCCGAGCGCAATG CTGGCTCGAAAGATGTGGCCCGCACTAAAGATAAGGCTGAACGCGACGTGAAAATTGCCGCCATGAAGCTGGTTGGCGAT CAAATTACTGAACTCGATGCACAGGCAAATGCAATCGATTTGGAATTGCACAATCTTCTGCTCGATTTACCTAACTTGCC GTTGCCCGAAGTGCCTGTTGGCAAGGATGAACACGATAATGTTGTGGTGCGGGTCGAAGGTACAATCCAAGAGCCTGATT TTGCGGTTAAGCCACACTGGGAGCTAGGCGAAGCCCTCGGGATTCTCGATTTTGAGCGAGGCGTGCGCATGAGTGGTACA CGCTTTTTCGTGATGAAAGGCTTGGGCGTGCGCTTGCAACGGGCCTTGATTAGCTGGATGATCGATATGCATGTTGATCA GCATGGTTACACCGAATTGGCCGTGCCCTACTTGGTTAAGGCCGATGCCATGGTTGGCACTGGCAACTTGCCCAAATTTG CCGACACGATTTTTCATATCGAAGATACCGATTTATGGCTGATTCCGACCGCTGAAGTGCCAGTTACCAACTTGCATCGC GAAGAAATTTTAGATAAAGCTCAATTGCCATTACGCTATGTGGCGCATACCCCATGTTTCCGCAACGAGCAAATGAGCGC TGGACGTGATGTCCGTGGCATCAAGCGGCTGTATCAATTCGATAAAGTCGAGATGGTCAAAATGGTTGAGCCAGCTACCA GCTACGATGAATTATTCTCGCTGATTAGCAATGCTGAGGATGTTTGCAAAGGCTTGAAAATTCCTTATCGCTTGTTGCAA TTGTGCACCGCCGATTTGGGCATTGCCACGGTCAAGTACGATTTGGAAATGTGGGCACCTGGCATGAACGAATGGCTGGA AGTTTCGTCGTGTGGCTTGTTTGGTGATTATCAAGCTCGTCGTGCCAATATTCGCTATCGCCCCGAAGCTGGGGCAAAAC CTGAGTTTGTGCATACATTGAATGGTTCGGGCTTGGCTTTGCCACGGGTGATCATCGCGATTCTCGAAAATTATCAAAAT GCTGATGGCAGCGTGACGGTTCCCGAAGTGCTGCGACCGTACATGGGCGGCATCGAACGGATTGGGTAA Protein sequence : MLDIRLFREQPELVREGFAKVGRDPGLVDQVIGLDLKRREAITEVERLKAERNAGSKDVARTKDKAERDVKIAAMKLVGD QITELDAQANAIDLELHNLLLDLPNLPLPEVPVGKDEHDNVVVRVEGTIQEPDFAVKPHWELGEALGILDFERGVRMSGT RFFVMKGLGVRLQRALISWMIDMHVDQHGYTELAVPYLVKADAMVGTGNLPKFADTIFHIEDTDLWLIPTAEVPVTNLHR EEILDKAQLPLRYVAHTPCFRNEQMSAGRDVRGIKRLYQFDKVEMVKMVEPATSYDELFSLISNAEDVCKGLKIPYRLLQ LCTADLGIATVKYDLEMWAPGMNEWLEVSSCGLFGDYQARRANIRYRPEAGAKPEFVHTLNGSGLALPRVIIAILENYQN ADGSVTVPEVLRPYMGGIERIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-91 | 52 |
