Gene Information

Name : Haur_4029 (Haur_4029)
Accession : YP_001546789.1
Strain : Herpetosiphon aurantiacus DSM 785
Genome accession: NC_009972
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 5143906 - 5144652 bp
Length : 747 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_1723 ABC transporter related

DNA sequence : 
ATGAACGCTAGTGCAAAACCGCTTGCAATTCACGATTTAACTGTGGCCTACCAAGATAAGCCGGTGTTGTGGGATATTGA
TTTGAGTGTGCCAACGGGCGTGTTGGCGGCGATTGTTGGGCCAAATGGCGCAGGCAAATCAACCTTGATCAAGGCGACAC
TTGGCTTGATGCCCGTGGCGGCTGGTACGGTCGAGATGTTTGGCCAGCCCTATGCCAAAGCACGCCGGATGGTTGGCTAT
GTGCCACAACGCTCCAGCGTCGATTGGGATTTTCCGACTAATGCCTTGGATGTGGTGTTGATGGGAACCTACGGCCAACT
CGGTTGGATCAAACGACCCAGCAAAGCCGACCGCGAATGGGCGCTGCATTGTTTAGAGCAACTGGCCATGGCCGATTTTG
CCCAACGCCAAATTAGCCAGCTCAGCGGCGGCCAACAACAACGGGTCTTTTTGGCCCGCGCTTTGGCCCAACGTGCCCAA
CTTTATCTGATGGATGAGCCGTTTGTCGGCGTGGATGCCGTGACCGAACGAGCGATCATCAGCCTATTGCAACAACTGCG
CTCGGACGGCAAAACCGTGATCTGCGTGCACCACGACCTTGATTCAGCCCCCGAATATTTTGATTGGGTGGCCTTGTTGA
ATGTACGCATGATCGCTGCTGGTCCGATGAAAACAATCTGGACACCCGAGAATATTAGCCAAACCTATGGTGGCCGAACC
CAAAGCCTGATTCGAGGTGCTGCATGA

Protein sequence : 
MNASAKPLAIHDLTVAYQDKPVLWDIDLSVPTGVLAAIVGPNGAGKSTLIKATLGLMPVAAGTVEMFGQPYAKARRMVGY
VPQRSSVDWDFPTNALDVVLMGTYGQLGWIKRPSKADREWALHCLEQLAMADFAQRQISQLSGGQQQRVFLARALAQRAQ
LYLMDEPFVGVDAVTERAIISLLQQLRSDGKTVICVHHDLDSAPEYFDWVALLNVRMIAAGPMKTIWTPENISQTYGGRT
QSLIRGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-40 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-40 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-40 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 5e-37 42
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 7e-37 42
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 7e-39 42
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 7e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Haur_4029 YP_001546789.1 ABC transporter-like protein BAC0400 Protein 1e-65 60
Haur_4029 YP_001546789.1 ABC transporter-like protein BAC0440 Protein 2e-37 44
Haur_4029 YP_001546789.1 ABC transporter-like protein BAC0350 Protein 1e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Haur_4029 YP_001546789.1 ABC transporter-like protein VFG0526 Protein 9e-41 43