Gene Information

Name : Haur_3808 (Haur_3808)
Accession : YP_001546572.1
Strain : Herpetosiphon aurantiacus DSM 785
Genome accession: NC_009972
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 4779792 - 4780673 bp
Length : 882 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGAAACTTCAACATTTACCACCAAAGTCGGCTTGGCCCAAATGCTCAAGGGCGGCGTGATTATGGATGTGGTTACGCC
AGACCAAGCTAAAATTGCTGAAGAAGCTGGCGCAGTCGCCGTGATGGCGCTCGAACGGGTTCCAGCCGATATTCGTAAGG
ATGGCGGCGTGGCTCGTATGAGCGACCCCGAAATGATCCAAGGCATCATTGAAGCAGTCACCATTCCTGTGATGGCTAAA
TCACGGATTGGTCACTTTGTTGAAGCGCAAATCCTCGAAGCGATTGGGGTTGATTATATTGACGAGAGCGAAGTGCTCAC
GCCTGCTGATGAAGAACATCATACCAACAAGCACAATTTCAAAGTGCCATTCGTCTGTGGCGCTCGTAATTTGGGCGAAG
CCTTGCGCCGCATCACCGAAGGCGCAGCCATGATTCGCACTAAGGGCGAAGCTGGCACGGGCAATGTGGTTGAAGCTGTG
CGCCACGCTCGCACGATGTTCGCCGAAATTCGCCGTTTGCAAACCCTCGATCCCGATGAGTTGTTTGTGGCTGCCAAAAA
CTTGCAAGCTCCCTATGAATTGGTCAAGCAAATTGCTGAATTAGGCCGCTTACCAGTTGTCAATTTCGCTGCTGGCGGGA
TTGCAACTCCAGCCGATGCTGCTTTGATGATGCAATTGGGTGTTGATGGCGTGTTCGTTGGCTCAGGGATTTTCAAATCG
GGCAATCCTGCCAAACGCGCTAAAGCAATTGTTGAAGCAACCACCCACTTCCGCGATGCCAAGCTTTTGGCCGAAATTAG
CCGCAACTTGGGCGAAGCCATGGTCGGCATCAACATCGATACCATCCCAGAGAACGAGTTGCTCGCCAAACGCGGTTGGT
AA

Protein sequence :
METSTFTTKVGLAQMLKGGVIMDVVTPDQAKIAEEAGAVAVMALERVPADIRKDGGVARMSDPEMIQGIIEAVTIPVMAK
SRIGHFVEAQILEAIGVDYIDESEVLTPADEEHHTNKHNFKVPFVCGARNLGEALRRITEGAAMIRTKGEAGTGNVVEAV
RHARTMFAEIRRLQTLDPDELFVAAKNLQAPYELVKQIAELGRLPVVNFAAGGIATPADAALMMQLGVDGVFVGSGIFKS
GNPAKRAKAIVEATTHFRDAKLLAEISRNLGEAMVGINIDTIPENELLAKRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 9e-94 71
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-93 71
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-93 71