Gene Information

Name : Haur_3345 (Haur_3345)
Accession : YP_001546109.1
Strain : Herpetosiphon aurantiacus DSM 785
Genome accession: NC_009972
Putative virulence/resistance : Unknown
Product : RNA-binding S1 domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 4217602 - 4219722 bp
Length : 2121 bp
Strand : +
Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: drm:Dred_1124 RNA binding S1 domain protein

DNA sequence :
ATGGATTATGCCCATTTAATTGCCAAAGGCTTGACGGTGCGTGCCGAGCAAGTTACCGCTGCGATTCAATTATTCGATGC
AGGCAATACTTTGCCGTTCGTCGCTCGTTATCGTAAAGAGCAAACTGGTGGCTTGGATGAAGAACAATTACGCAGCATTC
AAAGCCAAATTGCCCGTTTACGTGAGCTTGACGAGCGGCGCGAGGCGATTTTGAGTGCTCTGCGCGAGCAAGGCAATTTG
AGTGATGAATTGGCCCAAGCCTTGGCCGCCGCTACTGATAAAACCACCCTCGAAGATTTGTATGCGCCGTTCAAGCCCAA
ACGCCGTACCCGCGCCAGCATAGCCCGCGAACGTGGCCTCGAAGGCTTGGCTGAAATTATTCAAATGCAGCCGAATGATC
CGATTGATGCTACCGCTCGCCAGTTTCTCAACGAACAGGTTGCCAGCATTGAAGAGGCCTTGGCTGGAGCACGCGATATT
GTAGCCGAGCAAATCAGCGATCATCCTGAGGTGCGCCGTCAAACTCGCGAACGCGCTTTGCGTTGGGGCGTGGTTCGCAG
CGAGTTAATCGCCGATGCCGAGGATAGCAAGGGCGTATATCAAACCTACTATCAATTTGAGAGCACGGCCAGCCGCCTCA
AGCCTTACCAAGTGTTGGCGCTCAACCGTGGTGAAACCGAACATATTTTGCGTTTTAAAATTCAGATGGATCAACGTGAT
TGGTTTGATGTGGTTGCCAAGTATTTTCCGCTTGATCAACGTTCAGCTTGGGCCGAGCAACTGCGCTTGGCGATCCACGA
TGGCGCTGAGCGATTGCTCTTGCCAGCAATTGAACGCGATGTGCGCCGCGCCTTGACTGAGCAAGCCGAAAGCCATGCGA
TCACCGTCTTTGCCAAGAATGTGCATTCGTTGTTGCTGCAAGCGCCAATCGCCAATAATGTGGTGCTCGGGCTTGATCCA
GGCTACCGCACTGGTTGCAAAGTGGCGATTATCGGCCAAACTGGCAATGTGCTCACGACTGCCACGATTTATCCTCACAG
CGGCGCGGCAGCGCGTGAACGGGCGTTTCAAGAATTGCAAAGCTTGATCAAACGCTATGCTGTGAGTTTGATTGCCATTG
GCAATGGCACGGCCTCGCGCGAAACTGAGCAATTAGTCGCCGATGTGATTCGCCACCAAACTGGTTTGCACTATTTGATT
GTCAGCGAAGCAGGAGCCAGTGTTTACAGTGCTAGTACGCTTGCCCGCAGCGAATTGCCTGATCTCGATGTCAGCTTGCG
CGGCGCGGTTTCGATTGCACGGCGGGTGCAAGATCCCTTGGCCGAGTTGGTCAAAATCGAGCCAAAAGCGATTGGCGTAG
GCATGTATCAACACGATGTTGATCAATCGGCCTTGGGCAATGCGCTTGATGGCGTGGTTGAGAGCGCAGTTAATAATGTT
GGGGTTGATGTCAACACCGCTTCGCCTGCGCTTTTACGCTATGTTGCCGGGATTGGCCCCAAACTTTCGGCTCAAATTGT
CAGCCATCGCGAGGAACATGGCCCATTTCGTTCGCGGGTTGCACTCAAAAAGGTCAAAGGGCTTGGGCCAAAAGCCTTTG
AACAGGCCGCCGGATTTTTGCGAATTCGCGATGGCGATGAAGCCTTGGATGCCAGCGCAATTCACCCCGAAAGTTATACG
GTTACCCGTAATTTGTTGGACAAGCTGAATATTAACGCCAAAACAGGCCGCAACGAACGAATCAAACGCTTGGAAGATTT
GAAAAATCAGCCATTGCATAGCCTTGCGGCGGAATTGGGCACAGGCGTACCAACCCTGAGTGATATTATTGACCAACTGC
TGCGGCCAGGTCGCGACCCCCGCGAGGATGTGCCAGCACCAATTTTGCGCAGCGATGTGCTGGCTTTTGAAGATTTGCAG
CCGGGCATGCAGCTCAAAGGCACAGTGCGCAATGTCGTCGATTGGGGCGCATTTATCGATTTGGGGGTTAAGCACGATGG
CTTATTGCACCGTTCGCAAATTCCCCGTGGCCTGAGTTTGAGTGTTGGCGATATTGTCGATGTTAGCATTCAATCGATCG
ACCCAGATCGCAAACGGATTGCCTTAGTTTTAGCACAATAA

Protein sequence :
MDYAHLIAKGLTVRAEQVTAAIQLFDAGNTLPFVARYRKEQTGGLDEEQLRSIQSQIARLRELDERREAILSALREQGNL
SDELAQALAAATDKTTLEDLYAPFKPKRRTRASIARERGLEGLAEIIQMQPNDPIDATARQFLNEQVASIEEALAGARDI
VAEQISDHPEVRRQTRERALRWGVVRSELIADAEDSKGVYQTYYQFESTASRLKPYQVLALNRGETEHILRFKIQMDQRD
WFDVVAKYFPLDQRSAWAEQLRLAIHDGAERLLLPAIERDVRRALTEQAESHAITVFAKNVHSLLLQAPIANNVVLGLDP
GYRTGCKVAIIGQTGNVLTTATIYPHSGAAARERAFQELQSLIKRYAVSLIAIGNGTASRETEQLVADVIRHQTGLHYLI
VSEAGASVYSASTLARSELPDLDVSLRGAVSIARRVQDPLAELVKIEPKAIGVGMYQHDVDQSALGNALDGVVESAVNNV
GVDVNTASPALLRYVAGIGPKLSAQIVSHREEHGPFRSRVALKKVKGLGPKAFEQAAGFLRIRDGDEALDASAIHPESYT
VTRNLLDKLNINAKTGRNERIKRLEDLKNQPLHSLAAELGTGVPTLSDIIDQLLRPGRDPREDVPAPILRSDVLAFEDLQ
PGMQLKGTVRNVVDWGAFIDLGVKHDGLLHRSQIPRGLSLSVGDIVDVSIQSIDPDRKRIALVLAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 9e-132 44