Gene Information

Name : Haur_3045 (Haur_3045)
Accession : YP_001545811.1
Strain : Herpetosiphon aurantiacus DSM 785
Genome accession: NC_009972
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3846302 - 3847162 bp
Length : 861 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3069 ABC transporter related

DNA sequence : 
ATGGCAGCGGTTGCTTCCCAAGCGCATATTCGGCTTCAATCGGCCACCAGCCTGGCCCCAGCGCTTGAAGTTCGTCAACT
TAATATTCGGTATGATCAACGCACGGTGCTCAGTGATGTTTCGTTTCAGGCCCAATCGAGCCAATTAATTGGGATTATTG
GCCCCAACGGTGCTGGCAAAACTTCGTTGATCAAAGCAATTTTAGGCCTAATTCCTTCAACTGGCCAAATTTTGGTGGCT
GGCCAAGCTTTGGCCAAGCGTTCGCGCAAAGTGGCCTATGTGCCGCAAATTAGCGCGGTCAATTGGCGCTTTCCTGCCAG
TGTGCGCGATGTTGTGCTGATGGGGCGTTATGGCCAGCTTGGTTGGCTGCGTCGCCCGAAAAAAGCCGATTATGCGCTTG
CCGATGCTGCGCTTGAACAAGTCAATATGCAAGATTTTGCCGAACGTTCAATCGCTGATCTTTCGGGTGGTCAACAACAG
CGAGTCTTTTTGGCGCGAGCATTGGCCCAAGAACCCGATGTCTTGTTGCTCGACGAGCCAATTAGCGGCGTTGATGTGCC
CACGCAAGAGGTGATTTTGCATCTGCTGCGTGATTTGAGCAGTGCAGGCCGCACCCTCTTGGTGACGACTCACCATTTGC
AACATCTCGAACATCATTTTGATGCCTTGCTCTGCTTAAACCAATGCCTGATTGCTTATGGTCCGCCGACCGCCGTTATG
ACTCGCGAAGTAGTTGAGGCCACGTTTGGGCGTTCGTTGGTTTTAGTGCCAAGCGCCGAGCGCATTATTCTCGATTGCAA
TCATGGCAATTGCACCGAAAAACAGACTTTGATTAACCGCGACGGATCAGCGAATAATTAA

Protein sequence : 
MAAVASQAHIRLQSATSLAPALEVRQLNIRYDQRTVLSDVSFQAQSSQLIGIIGPNGAGKTSLIKAILGLIPSTGQILVA
GQALAKRSRKVAYVPQISAVNWRFPASVRDVVLMGRYGQLGWLRRPKKADYALADAALEQVNMQDFAERSIADLSGGQQQ
RVFLARALAQEPDVLLLDEPISGVDVPTQEVILHLLRDLSSAGRTLLVTTHHLQHLEHHFDALLCLNQCLIAYGPPTAVM
TREVVEATFGRSLVLVPSAERIILDCNHGNCTEKQTLINRDGSANN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-41 44
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-41 44
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 9e-42 44
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 9e-41 43
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 9e-41 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Haur_3045 YP_001545811.1 ABC transporter-like protein BAC0400 Protein 9e-45 50
Haur_3045 YP_001545811.1 ABC transporter-like protein BAC0350 Protein 5e-42 44
Haur_3045 YP_001545811.1 ABC transporter-like protein BAC0440 Protein 7e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Haur_3045 YP_001545811.1 ABC transporter-like protein VFG0526 Protein 5e-42 44