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Name : Haur_0288 (Haur_0288) Accession : YP_001543068.1 Strain : Herpetosiphon aurantiacus DSM 785 Genome accession: NC_009972 Putative virulence/resistance : Unknown Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 337162 - 339660 bp Length : 2499 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGTTCTTTGTTTTGATGGTTATGCAAGCAAATCAGCATATTATTGAACTTGGCAAAACCTTGGCTGCCGAAGAAAAGGC CGGCTGCGACGATACTGCAACCGACCACGGCATCAGCATATTTCTGCGCGAATGGCAGGCCCAACATCCCCAAGCCTTGC ATGAACCAGTTGTGCAGGGCGTGCTTGATGCCCTCGATGGCTACTCCGAGTTGAGCCATGCCGAACGTGAGGCTCGTTTG AGTGTTGCGCTTGATCGGCTGCGCAATTTGTTTCGCAAACAGCCCAAAGCTCCGGCTGAACCCGTGGGTGCTGTGCCGCC AATCGATACCTTGCTGAAAACTTTGCAAGGCATTGGCCCAAGTACTGCCCGTTCATTTGCCAAACTCGGGGTGCATACGC TCGAAGATTTGCTCTATCACGTGCCGCATCGCTACGACGATTTCAGCAAACGCAAGCAGATTTGTGATTTGGTGGTGGGC GAAACTGATACGGTGATTGTAACCGTCGATGCAATTAAAAGCTTCAATGCCAAAGGTCGCCAAGGTGTGGAAATTACCGT CGGCGACGATACTGGCGTGCTCAAGGCTTCGTGGTTTCGTGGTACGTGGATGGCCAAGCAGTTTCGCGAAGGCATGCGGA TTGTGCTCAGTGGCAAAGTCAGCATGTTCCGCGAAATGAAATCGATGAGCAACCCACAGTGGGAGCCATTTGTTGAAGAC GATTTGGTGCATACAGGTCGCCTTGTGCCCGTCCACCCACTGACCAAAGGCTTGCAAGATCGCAATGCCCGTCAAGTTAT TAAACGGGTCGTTGATGCAGTGACCCCAACCTTGTCCGACCCGTTGCCGATTGAACTCCGCGAACGAGCTGGATTATTGC CCTTGGGCGTTGCCATCAGCCAAATACATTTCCCTGATAGTTGGGCAATGGTGCAACGCGCCCGCCAACGCTTGGGCTTT GATGAATTTTTGTACATTCAATTGGGCGTATTACAGCGCAAACGGCTGTATCAAGGCGTGCAAGGCCAGCCAATTGCCTT TAATCAAGCGATTCATGATGCCTACCTGAGCAGTTTGCCCTTTGCTTTGACCAACGCCCAAACTCGGACATTTAACGAAA TTTGCCGTGATTTGGAGCGGCCAGTGCCCATGACACGGCTGGTGCAGGGCGATGTTGGTTCGGGCAAAACGGCGGTGGCG GCGGCAGCTTTGGTGCAGGCAGTCGCAGCGGGTTTTCAAGGGGCGATGATGGCTCCGACTGAAATTTTGGCCGAGCAACA TTATCGCGGGCTGAAAAAACTGCTTGCCAATGTTAAAATTCCAGGCCGTGAAACCAATAGCAATGGCGATTGGCGCGATG AACTTGATCAAGAAAAACGTAATCGCCTCGCCCAAATTAAGCAATTATTGATGCTGGCCGACGAGCCAGAACCCGAGCCA GGTGGCATTCGGGTTGCGCTGCTAACTGGTAGCCTCAAAGCTCGCCAACGCCGCGAAGCGCTCAAACTGATCGCCGATGG CGAAGTTGATATCATCATTGGAACCCATGCCCTGATTCAAGCCAATGTTGATTATCAAGCGCTCGGCTTGGCAGTGGTCG ATGAGCAACATCGCTTTGGGGTTGAGCAGCGCGAGGCACTCAAACGCAAGGGCTTCAATCCACATCTTTTGGTGATGACC GCCACGCCAATTCCGCGCTCGTTGGCCTTGACGATTTACGGCGATCTTGATGTTTCAGTGATCGACGAGCGCCCGCCAGG CCGCCAGCCAATTCGCACCAAATGGATCAGCTCGGGCGAACGCAGCAAAGCCTACAAACATATGCGCAAGGAGATTGCGG CTGGCCGTCAAGCCTTTGTAATTTGCCCGTTAGTTGAGGAAAGCGAAAAACTCGAAGATGTAAAATCGGCGATTGTTGAG CAAGAGCATTTGCAACACGAGATTTTCCCTGATCTCAAGGTAGGCTTGATTCATGGCCGTATGACTTCGAGCGAAAAAGA CACAATTATGGCCCAGTTTCGCGACCGCGAATTCGATATTTTGGTGGCGACGGCGGTGGTTGAAGTTGGGATTGATATTC CCAATGCCACGACGATTATGATCGAAGGTGCTGAGCGTTTTGGTTTGGCCCAATTGCACCAATTTCGCGGGCGGGTTGGG CGGGGCAGCCATCAATCGTTCTGCGTTTTGGTCAGCGATAAAGAAGATAACGATGTAACCGTGGCGCGGCTTTCGTCGAT GGAAGAGAGCGAAGATGGCTTCCGTTTGGCTGAAATTGACCTTGAATTGCGTGGGCCAGGTGAGTTTTTTGGTATTCGCC AGAGCGGCACGCCTGATCTTAAAGTTGCCCAGTTGACCGATACGCGCTTGCTGCATGCGGCGCGGATTGAAGCTGAGCGA ATATTGAAACTTGATCCTGAATTGGAATTACCTGAACATGCCAAAGTCCGCGAAAAACTCCAAGCTTTTTGGGCGGGCAT GGAAACTCAAAGCAACTAA Protein sequence : MFFVLMVMQANQHIIELGKTLAAEEKAGCDDTATDHGISIFLREWQAQHPQALHEPVVQGVLDALDGYSELSHAEREARL SVALDRLRNLFRKQPKAPAEPVGAVPPIDTLLKTLQGIGPSTARSFAKLGVHTLEDLLYHVPHRYDDFSKRKQICDLVVG ETDTVIVTVDAIKSFNAKGRQGVEITVGDDTGVLKASWFRGTWMAKQFREGMRIVLSGKVSMFREMKSMSNPQWEPFVED DLVHTGRLVPVHPLTKGLQDRNARQVIKRVVDAVTPTLSDPLPIELRERAGLLPLGVAISQIHFPDSWAMVQRARQRLGF DEFLYIQLGVLQRKRLYQGVQGQPIAFNQAIHDAYLSSLPFALTNAQTRTFNEICRDLERPVPMTRLVQGDVGSGKTAVA AAALVQAVAAGFQGAMMAPTEILAEQHYRGLKKLLANVKIPGRETNSNGDWRDELDQEKRNRLAQIKQLLMLADEPEPEP GGIRVALLTGSLKARQRREALKLIADGEVDIIIGTHALIQANVDYQALGLAVVDEQHRFGVEQREALKRKGFNPHLLVMT ATPIPRSLALTIYGDLDVSVIDERPPGRQPIRTKWISSGERSKAYKHMRKEIAAGRQAFVICPLVEESEKLEDVKSAIVE QEHLQHEIFPDLKVGLIHGRMTSSEKDTIMAQFRDREFDILVATAVVEVGIDIPNATTIMIEGAERFGLAQLHQFRGRVG RGSHQSFCVLVSDKEDNDVTVARLSSMEESEDGFRLAEIDLELRGPGEFFGIRQSGTPDLKVAQLTDTRLLHAARIEAER ILKLDPELELPEHAKVREKLQAFWAGMETQSN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 2e-84 | 41 |
