|
Name : Haur_0121 (Haur_0121) Accession : YP_001542901.1 Strain : Herpetosiphon aurantiacus DSM 785 Genome accession: NC_009972 Putative virulence/resistance : Unknown Product : NusG antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 154517 - 155083 bp Length : 567 bp Strand : + Note : TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: rca:Rcas_4321 NusG antitermination factor DNA sequence : ATGTCTGACAACGAAGAAGAAAAATCCACTACTCCCGAAGGTGTCCATTGGTACGTAATTCATACCTATTCAGGCTATGA AAACAAAGTGATGCAAAATCTCCGTCATCGGATTGAATCGATGGACATGCGGAACCAAATTTTCCGTGTGGTCGTGCCAA CCGAAGAAGAGATTGAAATCAAAAATGGGCAACGTCGGACTGTTCAAAAAAAGGTGTTTCCTGGCTATGTGCTCGTTCAA ATGGCCATGACCGACGATTCGTGGTATGTGGTGCGTAATACACCAGGTGTCACCTCGTTTGTGGGCATGGGAACTAAGCC ATCACCATTGGCCGATGAAGAAGTACGCTTTATTCTGAAGCAAATGGAAGAAGAAGCACCCAAAGTTAAGGTCAACTACG AAATTGGCCAAACTGTCAAAATTACCGATGGCCCCTTCACCGACTTTGAAGGTGTGGTCGATGAGATTGACGAAGAACGT GGGCGCGTGCGCGTGCTTGTCTCGTTCTTTGGCCGTGAAGCTCCAGTTGAACTTGATTTCTTACAAGTTATTCGCGTTAT AGAATAA Protein sequence : MSDNEEEKSTTPEGVHWYVIHTYSGYENKVMQNLRHRIESMDMRNQIFRVVVPTEEEIEIKNGQRRTVQKKVFPGYVLVQ MAMTDDSWYVVRNTPGVTSFVGMGTKPSPLADEEVRFILKQMEEEAPKVKVNYEIGQTVKITDGPFTDFEGVVDEIDEER GRVRVLVSFFGREAPVELDFLQVIRVIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 3e-35 | 45 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 3e-32 | 45 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 5e-37 | 43 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 5e-37 | 43 |
