|
Name : Dshi_4080 (Dshi_4080) Accession : YP_001542283.1 Strain : Genome accession: NC_009958 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 13911 - 15719 bp Length : 1809 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAAAGATCTGACACCAACCGTTACTACTGGACCCTTACCGGCATCCCGGCGCGTTTATCAGCCCGGAACGCTGCATCC CCAAATTCGCGTCCCTATGCGCGAGATTGATCTTCACCCTTCGGCTGGCGAACCGCCGGTTACGGTCTATGACAGCTCTG GCCCCTATACTGATCCCAGCGCTAAAATCGCTATCAACGGTGGCCTGCCGCGCCTGCGGGCAGACTGGATCGCCGCACGC AACGATATCGAGCTTTATGAGGGTCGCCATGTGCGTCCCGAGGATAATGGCTTTGCTGAGGGTGCCCGGCTGGTGCCCGA ATTCCCGGTCCGCCACAAGCCGTTGCAAGCCAAGGCAGGACGCGCGGTCACGCAGATGGCCTATGCCCGCGCCGGGATTA TAACACCCGAGATGGAATTTGTCGCCATCCGCGAGAACCTTGGCCGTAAGGCCGCGAAAGAGGCTCTGGTACGTGACGGC CAGGATTGGGGCGCGGCCATCCCCGATTTTGTGACTCCCGATTTCGTGCGCGAAGAAGTCGCCAGGGGCCGTGCGATCAT CCCCGCCAATATCAACCACCCCGAGGCCGAGCCGATGGGGATCGGGCGTAATTTTCTGGTCAAGATTAACGCGAATATCG GTAACTCCGCCGTCACCTCCTCGATGGAGGAAGAGGTGGAAAAGATGGTCTGGGCCACACGTTGGGGCGCGGATACGGTG ATGGACTTGTCTACGGGCCGCAATATTCACAACATCCGCGACTGGATCATCCGCAATTCTGCCGTACCCATCGGCACCGT TCCGCTTTATCAGGCGCTGGAAAAGGTCGAGGGTATCGCCGAAGACCTAAGCTGGGAGGTGTACCGCGATACGCTGATCG AACAGGCTGAACAGGGGGTGGATTACTTCACCATTCATGCTGGCGTGCGGCTGCATATGATCCCGATGACGATAAAGCGG GTGACCGGGATTGTATCGCGCGGCGGCTCGATCATGGCGAAATGGTGCCTGCATCATCACCGCGAAAGTTTCCTTTACGA GCACTTCGCTGAGATCTGCGAAATTGCCCGGGCATATGACGTCAGCTTCTCTTTGGGGGATGGGTTGCGTCCCGGCTCTA TCGCGGACGCCAATGATGAGGCGCAATTCGCCGAACTGGAGACGTTGGGCGAACTGACGCAGATCGCATGGAAGCATGAC TGTCAGGTGATGATCGAAGGACCGGGCCATGTAGCCATGCACAAAATCAAGGAGAATATGGACAAGCAGCTGGAGGTCTG CGGCGAGGCGCCGTTTTATACGCTCGGGCCGCTTACCACGGATATCGCACCGGGATATGACCACATTACCAGCGGTATTG GTGCGGCGATGATAGGCTGGTTCGGCACGGCGATGCTTTGCTATGTCACTCCCAAAGAGCATCTAGGTCTGCCTAACCGT GACGATGTGAAGATCGGTGTCATCACCTACAAGATTGCGGCTCATGCTGCCGATCTGGCCAAGGGGCATCCGGGAGCGCA GATCCGAGATGACGCGTTGTCACGCGCGCGGTTCGAGTTCCGCTGGGAGGATCAGTTCAACCTCTCGCTTGATCCCGAAA CCGCGCGCTCGATGCATGACGAAACCTTGCCGAAAGAGGCGCATAAGGTCGCGCATTTCTGCTCCATGTGCGGACCGAAG TTCTGCTCGATGCGGATCAGCCACGATATCCGCGCCGAGGCGCAGAAGGACGGCATGGCGAAAATGGCCGAGAAGTTCCG CAAAGGCGGTGATCTTTATGTTCCTCTTGATAAGGTAAAGGAAATATAA Protein sequence : MKDLTPTVTTGPLPASRRVYQPGTLHPQIRVPMREIDLHPSAGEPPVTVYDSSGPYTDPSAKIAINGGLPRLRADWIAAR NDIELYEGRHVRPEDNGFAEGARLVPEFPVRHKPLQAKAGRAVTQMAYARAGIITPEMEFVAIRENLGRKAAKEALVRDG QDWGAAIPDFVTPDFVREEVARGRAIIPANINHPEAEPMGIGRNFLVKINANIGNSAVTSSMEEEVEKMVWATRWGADTV MDLSTGRNIHNIRDWIIRNSAVPIGTVPLYQALEKVEGIAEDLSWEVYRDTLIEQAEQGVDYFTIHAGVRLHMIPMTIKR VTGIVSRGGSIMAKWCLHHHRESFLYEHFAEICEIARAYDVSFSLGDGLRPGSIADANDEAQFAELETLGELTQIAWKHD CQVMIEGPGHVAMHKIKENMDKQLEVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNR DDVKIGVITYKIAAHAADLAKGHPGAQIRDDALSRARFEFRWEDQFNLSLDPETARSMHDETLPKEAHKVAHFCSMCGPK FCSMRISHDIRAEAQKDGMAKMAEKFRKGGDLYVPLDKVKEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 69 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 69 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 65 |
