Gene Information

Name : Dshi_4089 (Dshi_4089)
Accession : YP_001542292.1
Strain :
Genome accession: NC_009958
Putative virulence/resistance : Unknown
Product : integrase catalytic region
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 21412 - 22221 bp
Length : 810 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: bbt:BBta_7691 integrase, catalytic domain

DNA sequence : 
GTGGCACACGTTGTGGAAGTCCACGGAGTGAGCCAGCGACGGGCGGGCAAGGCACTGGCCGTGGATCGGTCGAGCGTGCG
CTATCGCAGCGTGCGGCCTGACGATGCCGAAGCGAGGGCCGCCATGAAGGCTGTCGCGGCCGAGAGGCGGCGGTTTGGCT
ATCGCCGCATCCACGTGATGCTGGAACGGCAGGGGATCATGATGAACCTGAAGAAGCTCAGGCGGCTCTATCGCGAGGAG
AAGCTCCAAGTGCGCCGCCGGGGCGGCCGAAAGCGGGCTCTGGGGACACGCTGGCCGATGCTGGTGCCAGATGCCCCCAA
CCAGCACTGGAGCCTGGACTTCGTCAGCGATGCGCTGACGGATGGCAGACAGTTCCGCGTTCTGGCCGTGGTCGACGACT
ACAGCCGGGAGTGCCTGGCCTTGGTGGCGGACACGTCGCTCTCTGGCCTGCGCGTCGTGCGCGAGCTCGATGCGTTGATG
TTGCGCCGCGGCCAGCCTGCAATGGTGGTTTCGGACAATGGAACGGAACTGACCTCGGTGGCTGTCCTGAGCTGGTGCCA
GCGCACGGGCATCGAATGGCACTACATCGCGCCAGGAAAGCCCATGCAGAATGGCTTCGTCGAAAGCTTCAACGGACGCT
TCCGGGACGAGCTTCTCAACGAGTCGCTATTCTCGTCTCTGGCCGATGCCCGCGAGCAGATCCGGGCATGGCAGCACGAC
TACAACCACCATCGCCCTCACTCAGGACTGGGGAACATTCCGCCCGTCGAGTTCGTGGCAAAGAAGGGGCTGGAAATGCG
CGCCGCGTAG

Protein sequence : 
MAHVVEVHGVSQRRAGKALAVDRSSVRYRSVRPDDAEARAAMKAVAAERRRFGYRRIHVMLERQGIMMNLKKLRRLYREE
KLQVRRRGGRKRALGTRWPMLVPDAPNQHWSLDFVSDALTDGRQFRVLAVVDDYSRECLALVADTSLSGLRVVRELDALM
LRRGQPAMVVSDNGTELTSVAVLSWCQRTGIEWHYIAPGKPMQNGFVESFNGRFRDELLNESLFSSLADAREQIRAWQHD
YNHHRPHSGLGNIPPVEFVAKKGLEMRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 4e-44 49
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 1e-37 48
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 2e-27 45
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 4e-37 43