Gene Information

Name : Dshi_3679 (Dshi_3679)
Accession : YP_001541893.1
Strain :
Genome accession: NC_009955
Putative virulence/resistance : Unknown
Product : integrase catalytic region
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 81840 - 83333 bp
Length : 1494 bp
Strand : -
Note : PFAM: Integrase catalytic region; Transposase-like Mu; KEGG: art:Arth_4385 integrase, catalytic region

DNA sequence :
TTGATAATCCGGCGTCCGGTCACCGATCCCCTTACGGACAGTCTGACTGCGCTGCCCGAAGACCGACGCGCCGAGGCGTT
GCGCCGGTTCAACATACTGCGCCAGCACCTGATCGACGAAGTCCCCCTGACGGAAGTTGCCCGTGTCAGTGGTATCCCAC
TGCGCACGCTGCAAAGGTGGACGTCCCGATATCAGCGCTTTGGGCTTGCCGGACTTGCAAGAGCACCGCGATCTGATGCC
GGGCAACGGCGGCTATCATCTGAACTGGTCGAGCTGATTGAAGGGCTGGCCTTACACAAACCCCGTCTCTCTACCGCCGC
AATCCACCGGCGCATCATCCCGATTGTAAAATCGCGTGACTGGCCTGTCCCTTCTTATGCCACGATACATTCAATCGTGA
ATAGTCTTGATCCCGCGCTTGTCACGCTCGCTCATGATGGCGCAGCCGCCTATCGTGACCGGTTCGAAATGATTCATCGT
CATCGGGCCGAAAGGCCGAATGCTGTCTGGCAGACAGACCACACACAACTCGATCTAATCATCTTGGATACCAATGGTGC
GCCGGTGCGGCCGTGGCTTACCATCGTGCTTGATGATCATTCCCGTGCAGTGGCTGGGTACGCCGTCTTTGTCGGCGCAC
CTTCTGCTATCCAGACCGCTCTTGCCCTGCGGCAAGCTATCTGGCGAAAGGATACGCCTTCCTGGCCGATTTGTGGCCTG
CCGGATGTTTTATACACCGATCACGGCAGCGACTTCACCAGCAAGCACCTTGAGCAGGTCGCAGCTGACCTGCGCATTGA
GCTTGTGTTTTCCACGGTTGGCCGGCCACAGGGGCGTGGCAAGATCGAGCGGTTTTTCGGTACCATCAACACTGAGCTGT
TGCCTGAGTTACCGGGGGCTTTGTCGAACGGAAAACCAGCCTCCCCGCCACGCCTGTCGCTCGGCGAGTTGGAGGTTGCC
GTAAAGACTTTCGTCACCGCAGTGTACAACGCGCGCAAGCATAGCGAAATCGATGTGCCACCTAATGAGGCTTGGCGGGG
TGACGGCTGGCTACCTCGTATGCCGAACAGTCTGGAACAGCTCGATCTGCTACTGGTAATGGCCTTAAAAACCCGGCAGG
TCCGCCGTGACGGCATTCGGTTTCAGGGCTTGCTCTACACCGATCCCACACTTGCAGCCTATGTCGGCAAAACGGTCAAC
ATCCGCTATGACCCGCGCGACATTACCGAACTGCGCGTGTTCCACCGCGACCGGTTTTTGTGCCGCGCTGTCAGCGCCCA
TCATGCGCATCACACAATATCACTCAAGGATATCCAACAGGCCCGCACCGCCAGGCGGAAGGCTTTGCGCAACGAGATCA
CGGTAAAATCCAGACAGATCACCGAGTTTCTTCCCAAACCTGCGCCACCTCCAAGTCGTGAAAAGCAAAATCCCGTATCG
CCTGACGCCCCGCGCCAAAAGCTGGTCCTGTATAAAACGGACAAGACGCCATGA

Protein sequence :
MIIRRPVTDPLTDSLTALPEDRRAEALRRFNILRQHLIDEVPLTEVARVSGIPLRTLQRWTSRYQRFGLAGLARAPRSDA
GQRRLSSELVELIEGLALHKPRLSTAAIHRRIIPIVKSRDWPVPSYATIHSIVNSLDPALVTLAHDGAAAYRDRFEMIHR
HRAERPNAVWQTDHTQLDLIILDTNGAPVRPWLTIVLDDHSRAVAGYAVFVGAPSAIQTALALRQAIWRKDTPSWPICGL
PDVLYTDHGSDFTSKHLEQVAADLRIELVFSTVGRPQGRGKIERFFGTINTELLPELPGALSNGKPASPPRLSLGELEVA
VKTFVTAVYNARKHSEIDVPPNEAWRGDGWLPRMPNSLEQLDLLLVMALKTRQVRRDGIRFQGLLYTDPTLAAYVGKTVN
IRYDPRDITELRVFHRDRFLCRAVSAHHAHHTISLKDIQQARTARRKALRNEITVKSRQITEFLPKPAPPPSREKQNPVS
PDAPRQKLVLYKTDKTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp YP_253675.1 transposase for Tn552 Not tested ¥ÕSh1 Protein 2e-103 45
tnp YP_254523.1 transposase for Tn552 Not tested ¥ðSh2 Protein 2e-103 45