Gene Information

Name : Dshi_3609 (Dshi_3609)
Accession : YP_001541823.1
Strain :
Genome accession: NC_009955
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 14461 - 16647 bp
Length : 2187 bp
Strand : +
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mes:Me

DNA sequence :
GTGGCGATCCTGAACCGGGTTGTCGGGCCGAAAGTGGGCGGAACCGAACACCTGGCATTCGACGTGATCAACGGGCGAAT
GACCATCCTCGATAGCGCCGAGAGGATACCAGACGACGAAGTCACGCAGTTGGTCGCAACGACCGGCATGAGCGCCAAGC
CATGGGATGCCGACAACGCAGCAGAGGACCAGGCGGCGCATCTGGCACGTCAGAAGCGCTTTACCTCGTTGAGCGGCGGC
TTCTGGGCGGCGGGATTCCTTTTTCACATTGTCGAGACCGGCATGGGCGGCGCGCTCGGGCTCTTTGCGGGCCATGGCGA
GGTGCCTATGCCTATGGTGGAAGCAGGGATCTTCGCCGTCGCGATTCTTTTTGGCGTCTGGCTTGTCGCGCCCAAGGCCT
GGTCTTCGGCGCGGAGGCTTAGCCCCGACATGAACCTGCTCATGGTGGTGGCCGTCGCGGGCGCCATCGGCCTCGGCGAG
TTTTTTGAGGCCGCGACGGTCGCCTTCTTCTTCTCGCTTTCGCTTTATCTTGAGAGCTGGAGCGTGGGGCGGGCGCGTAA
TGCGGTTTCCGCGCTCCTCGATCTGGCGCCGCCAACGGCGCGGGTTCTTTACGACGACGGATCTGAATCCGACGTTCCGG
CCGCGGCCGTGGCAGTCAATGCAAGGTTTATCGTGCGCGGCGGCGACCGGATCCCCCTCGACGGTGAGGTCGTGGACGGG
GCAGGGGCCGTCGATCAGGCCCCAATTACTGGGGAAAGCGCGCTAGTGCCCAAGGAACCAGGCGACGAGGTCTATGCCGG
CACGATCAACGGCGAGGGCACACTGACGGTGCGGGCGACGAAGGCCGCCTCGGACACGGTGCTCGCGAAAATCATTCGCA
TGGTGGGCGATGCCCATGCCCGCCGCGCGCCGGTCGAACAGTGGGTGGCCAAGTTCGCGCGCATCTACACACCCATCGTG
ATGGCTTTGGCGATCGCCATCGCGCTGGTGCCGCCACTGCTGCTCGGCGGCGCCTGGGACTACTGGTTCTACAATGCTCT
GGTCCTTCTGGTCATCGCATGTCCTTGCGCGCTGGTCATTTCTACGCCGGTCTCCATCGTGGCAGCGCTGACCGCGTCGG
CACGGGCGGGGGTGCTCATCAAGGGCGGCGCCTATGTCGAGGCGCCGGGGCGGACCACGGCACTGGCGATGGACAAGACC
GGGACGATCACCATGGGCGAGCCTGAGGTGGCGGCGGTTCACCCACTGGTCGGCGTTTCCGCACGCGATCTCATGGCGCT
GGCAGCAAGCCTGGAGGCGCGGTCTTCACACCCGCTGGCACGCGCCATCCTCTCGCGCGCCGAAGCCGATGGTGTTTCCG
TGTCTGCCGCAGAGGACACCCGTACCGTGCCCGGGCGCGGTCTGGAAGGACGCGCCGACGGGCGCGCTATCTGGCTCGGC
TCGGATCGCTTCGCCGAAGAGAAGGGGTTCGGCAATGCCATTCCGGCGGATCTGCGGGATCGGATCGAAGGGGCAGGGAG
CACCCTCGTTGCCGTGGGTGACGAGACCGGCGTGACCGGCGTACTGGAGCTTCGCGACCGCATCCGCCCAGATGCAAAGG
GGATCGTTGCGCGTCTGCATGCGCAGGGTGTGAAGACCATCGTGATGTTGACGGGCGACAACGAACGCACCGCGCGCGCG
GTGGCAGCCGAAGTCGGCATCGACGAGGTGCGCGCCGAACTTTTGCCAGAAGACAAGGTGACGGCCATTGAGGAACTCGT
CGAAAGCCACGACATGGTGGCGATGATCGGCGACGGTGTGAATGACGCACCGGCCATGGCGCGGGCGCATTATGCCATCG
CCATGGGCGCTGTCGGATCGGATGCCGCGATCGAGACGGCCGACATCGCGCTGATGACCGACGACATCGGCAAGGTACCC
TGGCTTATCGGCCATTCGCGCCGTGCCATGACGATCATCCACCAGAATATCGGCATATCGCTGGCGACCAAGGCGCTGTT
CGTCGGGCTGACCGCGTTCGGTATGGCCTCAATGTGGGGCGCCATTGCTGCGGATGTAGGCGTGTCTCTGCTGGTGGTCG
CCAACGCACTTCGGCTCCTGAACGGCCATCAGGTTGAGGCCGGGCCTTCAGGCGGAGAACCGGTGGGCGAGCAGATGGCG
AAAGGAGCACTGGCGCACGGTCATTGA

Protein sequence :
MAILNRVVGPKVGGTEHLAFDVINGRMTILDSAERIPDDEVTQLVATTGMSAKPWDADNAAEDQAAHLARQKRFTSLSGG
FWAAGFLFHIVETGMGGALGLFAGHGEVPMPMVEAGIFAVAILFGVWLVAPKAWSSARRLSPDMNLLMVVAVAGAIGLGE
FFEAATVAFFFSLSLYLESWSVGRARNAVSALLDLAPPTARVLYDDGSESDVPAAAVAVNARFIVRGGDRIPLDGEVVDG
AGAVDQAPITGESALVPKEPGDEVYAGTINGEGTLTVRATKAASDTVLAKIIRMVGDAHARRAPVEQWVAKFARIYTPIV
MALAIAIALVPPLLLGGAWDYWFYNALVLLVIACPCALVISTPVSIVAALTASARAGVLIKGGAYVEAPGRTTALAMDKT
GTITMGEPEVAAVHPLVGVSARDLMALAASLEARSSHPLARAILSRAEADGVSVSAAEDTRTVPGRGLEGRADGRAIWLG
SDRFAEEKGFGNAIPADLRDRIEGAGSTLVAVGDETGVTGVLELRDRIRPDAKGIVARLHAQGVKTIVMLTGDNERTARA
VAAEVGIDEVRAELLPEDKVTAIEELVESHDMVAMIGDGVNDAPAMARAHYAIAMGAVGSDAAIETADIALMTDDIGKVP
WLIGHSRRAMTIIHQNIGISLATKALFVGLTAFGMASMWGAIAADVGVSLLVVANALRLLNGHQVEAGPSGGEPVGEQMA
KGALAHGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 7e-95 42
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 2e-97 41
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 2e-97 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dshi_3609 YP_001541823.1 heavy metal translocating P-type ATPase BAC0298 Protein 3e-94 48
Dshi_3609 YP_001541823.1 heavy metal translocating P-type ATPase BAC0461 Protein 3e-80 42