Gene Information

Name : Dshi_3737 (Dshi_3737)
Accession : YP_001541948.1
Strain :
Genome accession: NC_009955
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 143251 - 143583 bp
Length : 333 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: psp:PSPPH_A0090 ISPsy21, transposase orfA

DNA sequence :
ATGACAAAAAGCAAAATGGCAAATCGCTACTCGCCAGAGGTCCGCGCGCGTGCGGTCCGGATGGTGTTCGAGCATCAAGG
TTCCTACGAAACGCAGGCGGGCGCGATAGCGGCCATCGCACCCAAGATCGGCTGCATTCCCCAGACTTTGCGCGAATGGG
TCAAACAGGCTGAGAAGGACAGCGGCATCCGTGATGGCGTGACAACCGAGGAACGCGACCGGATCAAGACCCTCGAACGC
GAGAACCGGGAACTGCGCCAGGCGAACGAGATCCTGCGCAAGGCATCAGCTTATTTTGCGCAGGCGGAACTCGACCGCCC
ACTGAAGCGATGA

Protein sequence :
MTKSKMANRYSPEVRARAVRMVFEHQGSYETQAGAIAAIAPKIGCIPQTLREWVKQAEKDSGIRDGVTTEERDRIKTLER
ENRELRQANEILRKASAYFAQAELDRPLKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 1e-20 65
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 1e-20 65
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 1e-20 65
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 1e-20 65
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 1e-16 64
unnamed AAF09023.1 unknown Not tested SHI-O Protein 3e-17 63
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 3e-17 63
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 3e-20 63
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 3e-20 63
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 3e-20 63
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 3e-20 63
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 5e-20 63
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 7e-17 62
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-16 62
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 1e-16 62
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 5e-15 62
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 1e-16 62
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 4e-18 62
SF3706 NP_709445.1 IS629 ORF1 Not tested SHI-2 Protein 4e-16 62
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 4e-18 62
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 4e-18 62
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 7e-17 62
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-16 62
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 8e-16 61
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-16 61
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-16 61
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 8e-17 61
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-16 61
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 8e-17 61
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 1e-16 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dshi_3737 YP_001541948.1 transposase IS3/IS911 family protein VFG1603 Protein 4e-17 64
Dshi_3737 YP_001541948.1 transposase IS3/IS911 family protein VFG0643 Protein 3e-17 62
Dshi_3737 YP_001541948.1 transposase IS3/IS911 family protein VFG0606 Protein 1e-16 62
Dshi_3737 YP_001541948.1 transposase IS3/IS911 family protein VFG1717 Protein 3e-17 61