Gene Information

Name : Sare_5018 (Sare_5018)
Accession : YP_001539752.1
Strain : Salinispora arenicola CNS-205
Genome accession: NC_009953
Putative virulence/resistance : Resistance
Product : SSS family solute/sodium (Na+) symporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 5687137 - 5688810 bp
Length : 1674 bp
Strand : +
Note : TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: stp:Strop_4508 SSS sodium solute transporter superfamily

DNA sequence :
ATGACCACGGTCCTCGCGGCTGAGGCGGGCGACAACACCGCCCGGAACCTGACCATCACCCTGTTCCTGGTCTTCGTGGC
GGTGACGCTGGCGATCACGGTGTGGGCCAGCCGGCAGACCAAGACCGCCACCGACTTCTACGCGGGTGGCAGGTCCTTCT
CCGGCTTCCAGAACGGCATGGCGATCGGCGGCGACTACATGTCGGCGGCGTCGTTCCTCGGCATCGCCGGCCTCATCGCG
CTCTACGGCTACGACGGCTTCCTCTACTCGATCGGCTTCCTGGTCGCCTGGCTGGTGGCGCTGCTGCTCGTCGCCGAGTT
ACTGCGCAACTCCGGCCGTTACACGATGGCCGACGTGCTCGCCTTCCGGATGCGGCAACGTCCGGTGCGTACGGCCGCCG
CGGCCTCCACCATCACAGTGTCGATCTTCTACCTGCTCGCTCAGATGGTCGGTGCGGGGGCACTGGTCGCTCTGCTGCTC
GGCATCAAGCCGGGCACGACATTGCTCGGCATGGACGCGGACGCCGCCAAGATCGCCACAATCATCATGGTTGGCGCGCT
GATGGTCACCTACGTCACGGTGGGGGGCATGAAGGGCACCACCTATGTGCAGATCGTCAAGGCGTTTCTGCTGATGGGGG
GCGCCGTCGCGATGACGCTGCTGGTGCTGGCGAAGTACAAGTTCAACCTCTCCAGCCTGCTCGGCGACGCGGCGGACGCC
TCCGGCAAGGGAGCCGCCTTCCTCGAACCGGGGCTCCGGTACGGCGTCGAGACACCCGGTGACGCCCTGAAGACCTTCTA
CAGCAAGCTCGATCTGCTCTCTCTCGGCATCGCGCTGGTGCTCGGCACGGCCGGCCTGCCGCACATCCTCATCCGCTTCT
ACACCGTGCCCACGGCGAAAGCCGCCCGGAAGAGTGTCCTCTGGGCGATCGGCATCATCGGCACCTTCTACCTACTCACC
CTGGCCCTGGGCTTCGGCGCCGCAGCACTCGTGGGAGGCGAGGCGATCACTGCGCAGGACCGGGCTGGTAATACCGCCGC
GCCGCAGCTCGCCGAGGCGCTGGGGATGGACTTTCTCGGGGGCGACCTGGGCGGGGCGACCCTGCTGGCGGTCATCGCGG
CGGTCGCCTTCGCGACCATCCTGGCGGTGGTCGCCGGCCTGACCCTGGCCTCCTCGTCCAGCCTGGCGCACGACTTCTAT
GCCAACGTCGTCAAGGACGGGGCCGCCTCCGAACGCCAAGAGGTGGCGGTGGCGCGAATCTCCGCCCTGGTGATCGGCGC
GATCTCGATCGTCCTCGCCATCTTCGCGCAGAACCTGAACGTCGCCTTCCTGGTCGCGCTCGCCTTCGCGGTAGCTGCGT
CGGGCAATCTGCCGGCGATCCTCTACAGCCTGTTCTGGCGGCGGTTCAACACCAACGGCGCGGTCTGGGCTATCTACGGC
GGCCTCTTCGCCGCGGTCTTCCTGGTGTTCTTCTCCCCGGTCGTCTCCGGGTCGCCGACCGCGATGTTCCCCGACCAGGA
CTGGCAGTGGTTCCCGCTGTCCAATCCGGGCCTGCTCTCCATCCCGTTCGGCTTCCTCTGCGGCTGGATCGGAACGGTGA
TCTCCAGGGAACGCGACGAACAGCGGTACGCCGAACTGGAGGTGCGCTCACTTACCGGCGCGGGCGCGCACTGA

Protein sequence :
MTTVLAAEAGDNTARNLTITLFLVFVAVTLAITVWASRQTKTATDFYAGGRSFSGFQNGMAIGGDYMSAASFLGIAGLIA
LYGYDGFLYSIGFLVAWLVALLLVAELLRNSGRYTMADVLAFRMRQRPVRTAAAASTITVSIFYLLAQMVGAGALVALLL
GIKPGTTLLGMDADAAKIATIIMVGALMVTYVTVGGMKGTTYVQIVKAFLLMGGAVAMTLLVLAKYKFNLSSLLGDAADA
SGKGAAFLEPGLRYGVETPGDALKTFYSKLDLLSLGIALVLGTAGLPHILIRFYTVPTAKAARKSVLWAIGIIGTFYLLT
LALGFGAAALVGGEAITAQDRAGNTAAPQLAEALGMDFLGGDLGGATLLAVIAAVAFATILAVVAGLTLASSSSLAHDFY
ANVVKDGAASERQEVAVARISALVIGAISIVLAIFAQNLNVAFLVALAFAVAASGNLPAILYSLFWRRFNTNGAVWAIYG
GLFAAVFLVFFSPVVSGSPTAMFPDQDWQWFPLSNPGLLSIPFGFLCGWIGTVISRERDEQRYAELEVRSLTGAGAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 2e-45 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sare_5018 YP_001539752.1 SSS family solute/sodium (Na+) symporter BAC0570 Protein 3e-46 46
Sare_5018 YP_001539752.1 SSS family solute/sodium (Na+) symporter BAC0564 Protein 6e-48 42