|
Name : rpmG (Sare_4334) Accession : YP_001539106.1 Strain : Salinispora arenicola CNS-205 Genome accession: NC_009953 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L33 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0267 EC number : - Position : 4899212 - 4899379 bp Length : 168 bp Strand : - Note : in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of th DNA sequence : GTGGCGAAGGCGACCGATGTCCGGCCGAAGATCACTTTGGCGTGTGTGGAGTGCAAGGAGCGCAACTACATCACGCGCAA GAACCGTCGCAACGATCCGGACCGGATCGAACTGAAGAAGTTCTGCCCGCGCGACGGCCGGCACACGATCCACCGCGAGA CCCGCTGA Protein sequence : MAKATDVRPKITLACVECKERNYITRKNRRNDPDRIELKKFCPRDGRHTIHRETR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpmG | NP_814353.1 | 50S ribosomal protein L33 | Not tested | Not named | Protein | 5e-08 | 52 |
| ef0106 | AAM75309.1 | EF0106 | Not tested | Not named | Protein | 3e-08 | 52 |
