Gene Information

Name : Sare_4178 (Sare_4178)
Accession : YP_001538958.1
Strain : Salinispora arenicola CNS-205
Genome accession: NC_009953
Putative virulence/resistance : Unknown
Product : binding-protein-dependent transport system inner membrane protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1173
EC number : -
Position : 4746104 - 4747072 bp
Length : 969 bp
Strand : +
Note : PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_3798 binding-protein-dependent transport systems inner membrane component

DNA sequence :
ATGAGTGACTTCGAGACGGTGGCGGCATCGGAGGACCCCAACGCCCGGCGGGGGCCCTCCGGCGAGCCGAACGCACCGAA
CCAGGTCGGCGGCACCTCCGTGAGCGCCGGCCGACCCCGAAGCCTCGCCGGCGACGCCTGGCGTGACCTCCGGCGCAAGC
CGATCTTCTGGATCAGCCTCACCCTGGTCCTGGTGGTCACCGCGATGGCCGCCGTACCGGCGCTGTTCACCAACGCCGAC
CCGGCCGACTGCATACTCGCCCGGCAGCACGCGGCACCGTCCGGCGGGGCCATCTTCGGGTACGACTTCCAGGGCTGCGA
CACCTACGCCCGGGCGGTCTACGGAGCCCGAGCCTCGCTGCTGGTCGGGGCCCTTTCGGCGCTGCTCACCGGACTTGTCG
CGCTCACCGTCGGCATGCTCGCCGGATACTTCGGCCGGTGGGTCGACGCGGTCCTCTCCCGGGTGATCGACATCGTGCTC
GGCATCCCCCTGCTACTCGCCGCGATCGTGCTGCTGAAGCGGGTCGCCAGCGACAGCGCGACGGTCCGGATCGCGGCGGT
GATCTTCGTCCTGGCGGTCCTCGGCTGGACGACGACGGCCCGGGTGGTCCGCTCGTCGGTCATCACGGCAAAGGAGCAGG
ACTACGTCGCCGCCGCCCGGATGCTCGGTGCCGGCAACGGCCGGATCATGTGGCGACACATCCTGCCCAACACGCTCGCC
CCCGCCATCGTGGTACTGACCATCGCTCTCGGGTCGTTCATCGCGGCCGAGGCGACGCTCTCCTTCCTCGGCATCGGCCT
CAAGGAACCCACGATCTCCTGGGGCATCGACATCAACAGTGGTCGGGTACACATGCGCGAATCGGCCACCCCACTGGTCG
TCCCGTCGACCTTCCTCGCGCTGACCGTGCTGGCGTTCATCATGCTCGGCGACGCGATCCGGGACGCCTTCGACCCGAAA
CTCCGGTGA

Protein sequence :
MSDFETVAASEDPNARRGPSGEPNAPNQVGGTSVSAGRPRSLAGDAWRDLRRKPIFWISLTLVLVVTAMAAVPALFTNAD
PADCILARQHAAPSGGAIFGYDFQGCDTYARAVYGARASLLVGALSALLTGLVALTVGMLAGYFGRWVDAVLSRVIDIVL
GIPLLLAAIVLLKRVASDSATVRIAAVIFVLAVLGWTTTARVVRSSVITAKEQDYVAAARMLGAGNGRIMWRHILPNTLA
PAIVVLTIALGSFIAAEATLSFLGIGLKEPTISWGIDINSGRVHMRESATPLVVPSTFLALTVLAFIMLGDAIRDAFDPK
LR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppC YP_005160016.1 putative peptide transport system membrane protein Not tested Not named Protein 1e-52 46