Gene Information

Name : Sare_0411 (Sare_0411)
Accession : YP_001535331.1
Strain : Salinispora arenicola CNS-205
Genome accession: NC_009953
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 472192 - 473055 bp
Length : 864 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kra:Krad_1869 ABC transporter-related protein

DNA sequence :
GTGACGGCGCCGGCGGTCGAGGCCGTGGACGTGTCCCGCACGTATCGGCTCGACGGTTTTTCGGTGCCGGCCCTGCGAGG
CGTCTCGCTGACCGTCGCGGCGGGTGACCATGTGGCCCTGGTCGGGCCCTCCGGTTCCGGTAAGTCGACCCTCATGCACC
TGCTCGGCGGGCTGGACCGACCGACCAGCGGCCGGCTGGCGATCGGTGGCCGGGATGTGGGCAGCCTCTCCGCCGCCGAG
CTGGCAGCGCTGCGCAACGAGACCATCGGCTTCGTTTTCCAGGCATTTCACCTGCTGCCCCGGACATCGGCGGTGGACAA
CGTGGCGCTGCCCCTGGTCTACCGAGGGGTCGGCGCGCGACAACGGCGGGAACGTGCCGCCGCGATGTTGGGTCGGGTCG
GCCTCGGGCACCGGCTCGGGCATCGGCCGAACCAGCTTTCCGGCGGCGAGCAACAGCGGGTGGCCATCGCCCGTGCACTC
GTGAACGATCCGGCGGTCCTGCTCGCCGATGAGCCGACCGGGAACCTGGACAGCGTCACCGGCGAGGCCGTGCTGAAACT
GCTCGAACGGCTCAACGCCGAGTCGGGGGTGGCGCTGGTGCTGGTCACCCACGACGACGAGGTCGCCATGCGGGCCGGGC
GGCGGATCGCGATGCGGGACGGGGTGATCGTGGCGGACAGTGTCGTCGACGGCAGCCATGATCTACCGGTGTCGGGCCCC
GGTGGGCTCCCTGACACACTGGTGCCCGCTCCCAGCACGGAGCCCCGGTCCGCGTCCGGAAGCGGCCCGGGGCGCATGTC
CGGTGGCACGGGTGGCGCCACCCGTGCCACCGGGCGCCGTGGGCACGGCGCGGAGCGGCCGTGA

Protein sequence :
MTAPAVEAVDVSRTYRLDGFSVPALRGVSLTVAAGDHVALVGPSGSGKSTLMHLLGGLDRPTSGRLAIGGRDVGSLSAAE
LAALRNETIGFVFQAFHLLPRTSAVDNVALPLVYRGVGARQRRERAAAMLGRVGLGHRLGHRPNQLSGGEQQRVAIARAL
VNDPAVLLADEPTGNLDSVTGEAVLKLLERLNAESGVALVLVTHDDEVAMRAGRRIAMRDGVIVADSVVDGSHDLPVSGP
GGLPDTLVPAPSTEPRSASGSGPGRMSGGTGGATRATGRRGHGAERP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-30 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 44
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-19 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sare_0411 YP_001535331.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-41 53
Sare_0411 YP_001535331.1 ABC transporter-like protein NC_012469.1.7686878. Protein 5e-46 50
Sare_0411 YP_001535331.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-33 41