Gene Information

Name : Sare_3486 (Sare_3486)
Accession : YP_001538279.1
Strain : Salinispora arenicola CNS-205
Genome accession: NC_009953
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 4020923 - 4022254 bp
Length : 1332 bp
Strand : +
Note : KEGG: pac:PPA1477 putative glycine betaine/proline ABC transporter; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGGAGACCGTGTCCGCACTCAGCGTTAAATCTCTGTACAAGGTTTACGGGAACCGCCCCGACAAGGTGGTCGACCTTCT
CCGGGACGGTACCCACCAGGACGAGAAGCTGGCCGGCATCTCGGCCACAGCGGCCGTCGTCGACGCGAACTTCGAGGTCA
AGCGTGGCGAGATCTTCGTTGTCATGGGCCTGTCCGGATCGGGGAAGTCAACCCTCATCCGGATGCTCAACGGACTCCTG
AAGCCCACGCACGGCACCGTCGAGGTGGACGGGGTCGACCTCACGAAACTCAAACCCACGGCGCTGCGAAAGCTACGCCG
CGAGAAGATCAGCATGGTCTTCCAGCACTTCGCGCTGCTACCGCACCGGTCCGTCCTGGCCAACGCCGGTTACGCGCTGG
AGGTGGCGGGCCTGCCCCGGGATGAGCGCCGCGAGCGGGCCCTCCAGGCACTGCGGATGGTCGGCCTGGACGCCTGGGCG
GACAAGCTGCCGCAGGAACTGTCCGGCGGCATGCGCCAGCGTGTCGGCCTGGCCCGCGCACTCGCCGCCGGCACCGACAT
CATGCTCATGGACGAGGCGTTCTCCGCCCTCGACCCGCTCATCCGCCGCGAGGTCCAGGACCAGCTGCTCGAGCTACAGG
CCGAACTCGGCAAGACGATCGTGTTCATCACCCACGACCTCAACGAGGCGATGCGCCTCGGAGACCGGATCGCGGTCATG
CGGGACGGCCGGATCGTCCAGATCGGTACCGCCGAGGAAATCCTCACCGCTCCGGCCAACGACTACGTCGCCCAGTTCGT
CGCCGACGTCGACCGGACCCGGATTCTCACCGCGTCATCGGTCATGGAACGGCCATCCGGCGTCGTCGACGTGAACGCCG
GTCCGCAGGTGGCCACCCGCGTGCTGCGTGAGACCCAGGCCTCAGCCATCTACGTCGCCGGGCCGGACGACAGGTACCTC
GGTACGGTGAGCGCCGACGCCGCCACCACTGCCGCCCGCGACGGCGGGAAGAACCTTCAGGGGATCGTCTCGACCGAGGA
TGTCCAGACCGTCGCCGAAGACACTCCCGTCGCCGAGCTCTTCGCGCCCTGTGCGACCAGCCGACATCCGGTCGCCGTCG
TCGACGACACCGGGCGACTGACCGGGGTGGTCTCACAGGTGGCACTCCTCAACGCCCTGGGCAACCTCGGCGTCGAGAAC
GGCGACCGGGGCCAGTCGCCCCCGGCGGTGGGCACGGAGCCCGCGTCCGCCGGAGCGGGCGCCGCCACCTCGGCGGTAGC
GGCGCAGCGGGTGGCCGCACAACCGGTCCGGCTGAAGGAGGATCCCGCATGA

Protein sequence :
METVSALSVKSLYKVYGNRPDKVVDLLRDGTHQDEKLAGISATAAVVDANFEVKRGEIFVVMGLSGSGKSTLIRMLNGLL
KPTHGTVEVDGVDLTKLKPTALRKLRREKISMVFQHFALLPHRSVLANAGYALEVAGLPRDERRERALQALRMVGLDAWA
DKLPQELSGGMRQRVGLARALAAGTDIMLMDEAFSALDPLIRREVQDQLLELQAELGKTIVFITHDLNEAMRLGDRIAVM
RDGRIVQIGTAEEILTAPANDYVAQFVADVDRTRILTASSVMERPSGVVDVNAGPQVATRVLRETQASAIYVAGPDDRYL
GTVSADAATTAARDGGKNLQGIVSTEDVQTVAEDTPVAELFAPCATSRHPVAVVDDTGRLTGVVSQVALLNALGNLGVEN
GDRGQSPPAVGTEPASAGAGAATSAVAAQRVAAQPVRLKEDPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 2e-87 48