Gene Information

Name : Sare_3385 (Sare_3385)
Accession : YP_001538178.1
Strain : Salinispora arenicola CNS-205
Genome accession: NC_009953
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 3908709 - 3910157 bp
Length : 1449 bp
Strand : -
Note : KEGG: stp:Strop_3160 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta

DNA sequence :
ATGGGCGTGACACGCCGCGCGAAGATCGTTTGCACACTTGGCCCCGCTACCTCCTCGCCGGAGCGTATTCGCGGTCTCGT
CGAGGCCGGCATGAATGTGGCGAGACTCAACTTCAGTCACGGTAGCCACGCCGACCACGAGGCGGTATGCCGGTTGGTCC
GGGAGGCGGCCGAGGCGGCGGGCAAGCCGGTCGCGGTGCTCGCCGATCTCCAGGGGCCGAAGATCCGGCTCGGCCGGTTT
GCCGACGGCCCGTACGAGTGGCGTACCGGTGACTCGGTGGTGATCACGAGCGATGACGTCGTCGGCAGCCGGGACCGGGT
CTCCTGTACCTACGGCAAGCTCCCCCAGGAGGTGAAGCCCGGTAACCGGCTGCTCATCGACGATGGTCGGGTAGCGGTCG
AGGTCACCGACGTCACCGGCACCGACATCCGTTGTCTGGTCACCGAGGGGGGGCCGGTCTCCAACAACAAGGGCGTGTCG
CTGCCGAACGTGGCCGTCAGCGTCCCGGCGCTGTCCGATAAGGACGCCGAGGACCTGCGGTTCGCCCTTGGCCTCGGAGT
CGACCTGGTGGCCCTCTCCTTCGTCCGCTCCGCCGACGACATCAAGCTGGTCCACGCCATCATGTCCGAGGAGGGCGTAC
ACCGGCCGGTGTTGGCCAAGGTGGAGAAGCCGGAGGCGGTGGACCATCTCGACGCGATCGTGTTGGCCTTTGACGGGGTG
ATGGTGGCCCGTGGTGACCTCGGGGTGGAGCTTCCGCTGGACCAGGTGCCCCTGGTGCAGAAGCGTGCGGTGCAGCTCTG
CCGGGAGAACGCAAAGCCGGTCATCGTCGCCACCCAGATGCTCGACTCGATGATCGAGAACTCCCGACCCACCCGCGCCG
AGGCATCGGACGTGGCCAACGCCGTGCTCGATGGCGCGGACGCGGTGATGCTCTCCGGTGAGACCAGCGTCGGTAAGTAC
CCGGTGCTCACGGTGAGCACCATGGCGAAGATCGTGACGACGACGGAGGCCGGCTCGATCGCGGTGCCCCGGCTCCAGCA
TGATCCGCGTACTCACGGGGGCGCGCTCACCATCGCCGCATCGTCGATTGCCCGGGCCATCAACGCCAAGGCCCTGGTGG
CGTTCTCACAGACCGGCGATACCGTGCGGCGGCTCTCCCGACTGCACTGCGACCTGCCGCTGCTCGCGTTCACTCCAGTG
CCGGAGGTGCGCAACCAGCTCGCTCTCTCCTGGGGCGTGGAGACGTTCCTGATGCCCTTCGTCGAGCACACCGACGCCAT
GTTCCGGCAGGTCGACCAGGCGCTGCTCGGCCTGGGGCGGGCCAGCCCCGGCGACTATGTCGTGATCGTCGCCGGTAGCC
CGCCCGGTACCCCTGGCTCGACCAACACCCTGCGCGTGCACCAGCTCGGGTCGCTGGTCGACCTCGCCTCGGCCCGGGCG
CTCCAATGA

Protein sequence :
MGVTRRAKIVCTLGPATSSPERIRGLVEAGMNVARLNFSHGSHADHEAVCRLVREAAEAAGKPVAVLADLQGPKIRLGRF
ADGPYEWRTGDSVVITSDDVVGSRDRVSCTYGKLPQEVKPGNRLLIDDGRVAVEVTDVTGTDIRCLVTEGGPVSNNKGVS
LPNVAVSVPALSDKDAEDLRFALGLGVDLVALSFVRSADDIKLVHAIMSEEGVHRPVLAKVEKPEAVDHLDAIVLAFDGV
MVARGDLGVELPLDQVPLVQKRAVQLCRENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKY
PVLTVSTMAKIVTTTEAGSIAVPRLQHDPRTHGGALTIAASSIARAINAKALVAFSQTGDTVRRLSRLHCDLPLLAFTPV
PEVRNQLALSWGVETFLMPFVEHTDAMFRQVDQALLGLGRASPGDYVVIVAGSPPGTPGSTNTLRVHQLGSLVDLASARA
LQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 4e-70 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 4e-70 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 4e-70 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sare_3385 YP_001538178.1 pyruvate kinase VFG0479 Protein 2e-70 41