Gene Information

Name : Sare_2744 (Sare_2744)
Accession : YP_001537570.1
Strain : Salinispora arenicola CNS-205
Genome accession: NC_009953
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3125559 - 3126368 bp
Length : 810 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_2555 ABC transporter related

DNA sequence : 
ATGCGGTCCCGGCTACGCGGTAACACGATGACCCTGGCCTACGAACGGCGGACCATTTCCCGCGAGCTGACCGTCGATGT
GCCCGACAACTCGTTCACCGTGGTCATCGGCCCGAACGCGTGCGGCAAGTCCACTCTGCTGCGGGCCCTGTCGCGGCTGC
TCCGGCCGACCGTCGGTGCGGTCCTGCTGGACGGGACGGACATCCACCGGCGCCCCGCCCGGGACGTCGCGAAGACCCTC
GGCCTACTGCCGCAGTCGTCGATCGCCCCGGACGGCATCGCCGTGGCCGAACTCGTGTCCCGAGGCCGATACCCGCACCA
GGGGCTGCTGCGGCAGTGGTCCCGCGAGGACGAACGGGTGGTCGCCGAGTCGATGGCCGCCACCGGCGTCACCGACCTCG
CCGACCGTCCGGTGGCCGAACTCTCCGGCGGGCAGCGGCAACGGGTCTGGCTCGCCATGGCCCTCGCCCAGCAGACCCCG
CTGCTTCTCCTCGACGAACCCACCACGTACCTGGACATCGCCCACCAGATCGAGATCCTCGACCTCTGCGCCCGGCTACA
CGCTCAGGAGGGCCGCACATTGGTCGCGGTGCTGCACGACCTGAACCACGCCGCTCGCTACGCCACCCACCTGATCGCGA
TGCGCGACGGACAGGTGGTCGCCACCGGCCCGCCCGAGACGGTGGTCACCGCCGCGCTCGTCGAGGAGGTGTTCGGCCTG
CCCTGCCGGGTCATCGACGACCCGGAGACCGGCACCCCGCTGGTCGTGCCGGCCGCCCGTCACCGTGCCGCGATCCCGGC
CACGGTATGA

Protein sequence : 
MRSRLRGNTMTLAYERRTISRELTVDVPDNSFTVVIGPNACGKSTLLRALSRLLRPTVGAVLLDGTDIHRRPARDVAKTL
GLLPQSSIAPDGIAVAELVSRGRYPHQGLLRQWSREDERVVAESMAATGVTDLADRPVAELSGGQRQRVWLAMALAQQTP
LLLLDEPTTYLDIAHQIEILDLCARLHAQEGRTLVAVLHDLNHAARYATHLIAMRDGQVVATGPPETVVTAALVEEVFGL
PCRVIDDPETGTPLVVPAARHRAAIPATV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-60 52
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-60 52
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-60 52
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-60 52
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-57 51
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-43 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-52 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-52 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-46 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-44 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-44 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-44 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-44 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sare_2744 YP_001537570.1 ABC transporter-like protein BAC0164 Protein 1e-43 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sare_2744 YP_001537570.1 ABC transporter-like protein VFG0925 Protein 5e-68 57
Sare_2744 YP_001537570.1 ABC transporter-like protein VFG1042 Protein 1e-43 47