Gene Information

Name : Sare_2479 (Sare_2479)
Accession : YP_001537313.1
Strain : Salinispora arenicola CNS-205
Genome accession: NC_009953
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2836942 - 2837670 bp
Length : 729 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: stp:Strop_2336 short-chain dehydrogenase/reductase SDR

DNA sequence :
GTGAATCCCGTAACCGTCATCACCGGCGGCAGCCGCGGAATCGGCGCCGCCACCGCCCGCCGCCTCGCCCGCGCCGGCCA
CCACATCGCCTTCTCCTACCAACGCGACCGCGCCGCCGCCGACACCGTGCTCGCCGAGCTACACGCCACCGGAACCACCG
CCGTCGCCGTACCCGTCGACACCCGCGACCCCGACCAGATCGCCACCCTGTTCGCCGCCGCAGCCGACCTCGGCGACCTC
ACCGGCCTGGTCAACAACGCCGGCGTCACCAGCCCCATCGGCCCCTTCGTCGACCTCGACCCCACCGACCTACGCCACGT
CGTCGACGTCAACCTCATCGGCTACATACTCGCCGCCCAGCAGGCCGCCCGCCAGATGCCCGCCGGCGGCGCCATCGTCA
ACATCTCCTCCGCCGCCGCCACCCTCGGCTCACCCGGCGAATACGTCCACTACGCCGCCGTCAAAGCCGGCACCGACGCC
CTCACCATCGGCCTGGCCAAGGAACTCGCCCCCCGCGGCATCCGCGTCAACGCCGTCGCCCCCGGCATCGTCCGCACCGA
CATCCACACCCTGTCCGGCCAACCCGATCGGCCCGAGCAAACCGCCTCCCGCATCCCACTCGGGCGTCCCGGCGAACCCG
ACGAAGTCGCTGCCGCCATCACCTGGCTACTCGGACCCGACGCCAGCTACACCACCGGCACCATCCTTCGCGTCAGCGGC
GGCCTCTGA

Protein sequence :
MNPVTVITGGSRGIGAATARRLARAGHHIAFSYQRDRAAADTVLAELHATGTTAVAVPVDTRDPDQIATLFAAAADLGDL
TGLVNNAGVTSPIGPFVDLDPTDLRHVVDVNLIGYILAAQQAARQMPAGGAIVNISSAAATLGSPGEYVHYAAVKAGTDA
LTIGLAKELAPRGIRVNAVAPGIVRTDIHTLSGQPDRPEQTASRIPLGRPGEPDEVAAAITWLLGPDASYTTGTILRVSG
GL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 2e-35 46
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 2e-29 41