Gene Information

Name : Sare_2192 (Sare_2192)
Accession : YP_001537044.1
Strain : Salinispora arenicola CNS-205
Genome accession: NC_009953
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2522682 - 2525192 bp
Length : 2511 bp
Strand : +
Note : PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: stp:Strop_4275 ATPase AAA-2 domain protein

DNA sequence :
ATGTTCGAGCGGTTCACCGACCGAGCGCGTCGGGTTGTCGTCCTGGCTCAGGAAGAGGCCCGGATGCTCAACCATAATTA
TATTGGTACTGAGCATATTTTGTTGGGCCTGATCCATGAGGGTGAGGGTGTGGCGGCGAAGGCTTTGGAGAGTTTGGGGA
TCTCTCTGGAGGGTGTGCGTCAGCAGGTTGAGGAGATTATCGGGCAGGGGCAGCAGGCGCCGAGTGGGCATATTCCGTTT
ACTCCGCGGGCGAAGAAGGTGTTGGAGCTGTCGCTGCGGGAGGCGTTGCAGCTCGGGCATAACTATATTGGTACTGAGCA
TATTTTGTTGGGTCTGATCCGTGAGGGTGAGGGTGTCGCGGCTCAGGTGTTGGTGAAGTTGGGGGCGGATCTGAATCGGG
TTCGTCAGCAGGTGATCCAGTTGTTGTCGGGGTATCAGGGTAAGGAGCCGGCGGCGGCGGGGACGGCGCCGGGTGAGGCG
GCTCCGTCGACGAGTCTGGTGTTGGACCAGTTCGGTCGTAATCTGACGCAGGCGGCGCGTGAGGGCAAGCTTGATCCGGT
GATCGGTCGGGAGAAAGAGATCGAGCGGGTCATGCAGGTGTTGTCCCGGCGGACGAAGAACAATCCGGTGTTGATTGGTG
AGCCGGGTGTGGGTAAGACGGCGGTGGTGGAGGGCCTGTCGCAGCGGATCGTCAAGGGTGAGGTGCCTGAGACGTTGAAG
GACAAGCAGTTGTACACGCTTGATCTGGGCGCGTTGGTGGCGGGTTCGCGGTATCGGGGTGATTTCGAGGAGCGGTTGAA
GAAGGTCCTCAAGGAGATCCGTACCCGCGGTGACATCATTTTGTTCATTGATGAGATCCACACGTTGGTGGGTGCTGGTG
CCGCTGAGGGCGCGATCGACGCGGCGAGTATTCTGAAGCCGATGTTGGCGCGGGGTGAGTTGCAGACCATCGGCGCGACG
ACGTTGGATGAGTATCGTAAGCATCTGGAAAAAGACGCCGCGTTGGAGCGCCGGTTCCAGCCTATTCAGGTGGGTGAGCC
GTCACTGGCGCACACCATCGAGATCCTGAAGGGTCTGCGGGACCGGTACGAGGCGCATCACCGGGTGTCGATCACGGACG
CGGCGTTGGTGGCGGCGGCGACGTTGGCCGACCGGTACATCTCGGATCGGTTCCTGCCGGACAAGGCGATCGACCTGATC
GACGAGGCGGGCGCGCGGATGCGGATCCGGCGGATGACCGCGCCGCCGGACCTGCGGGACTTCGACGAGCGGATCGCGCA
GGTGCGTCGGGACAAGGAATCCGCGATCGACGCGCAGGACTTCGAACGGGCCGCGCAGCTGCGCGACACCGAGAAGCAGC
TGTTGGGTCAGAAGGCCCAGCGGGAGAAGGAGTGGAAGGCCGGTGACCTGGACGTGGTCACCGAGGTCGACGACGAGCAG
ATCGCCGAGGTCCTCGGGAACTGGACGGGGATCCCGGTGTACAAGCTGACCGAGGAGGAGACCTCCCGGCTGCTGCGGAT
GGAAGACGAACTCCACAAGCGGGTCATCGGGCAGGAAGACGCGGTCAAGGCGGTGTCGAAGGCGATCCGCCGGACCAGGG
CCGGTCTGAAGGACCCGAAACGGCCCTCCGGGTCGTTCATCTTCGCCGGCCCGTCCGGAGTCGGTAAGACCGAACTGTCC
AAAGCCCTCGCGGAGTTCCTGTTCGGCAGCGAGGACGCCCTGATCCAGCTGGACATGTCCGAGTTCCACGACCGGTACAC
GGTGTCGCGGCTCGTGGGTGCCCCTCCCGGCTACGTCGGCTACGACGAGGGCGGGCAACTGACCGAGAAGGTCCGCCGTA
GGCCGTTTAGCGTGGTCCTGTTCGACGAGATCGAAAAGGCCCACCCGGACGTGTTCAACACGCTGCTGCAGATCCTCGAG
GACGGCCGTCTCACCGACGGTCAGGGCCGGATCGTGGACTTCAAGAACACGGTCATCATCCTGACCACGAACCTCGGTAC
CCGCGACGTCGCCAAAGCCGTGTCGCTGGGCTTCCAGGCATCCGACGACTCCGACTCCAACTACGACCGGATGAAGCAGA
AGGTCAACGACGAACTCAAACAGCACTTCCGGCCCGAGTTCCTCAACCGTATCGATGACACGATCGTGTTCCACCAGCTA
CGCCACCAGGAAATCCTCTCGATCGTCGACATCATGATCGGCCGGATCGAAACCCAACTCCGGAACAAGGACATGGGCCT
CGAACTCACCGACAACGCCAAGAAATACCTCGCGACCAAGGGCTTCGACCCCGTCCTCGGCGCCCGACCACTACGCCGCA
CCATCCAACGCGACATCGAGGACAACCTCTCCGAACGGATCCTGTTCAACGAACTCACCCCCGGCCAGATCATCGTCGTC
GACTGCGACGGCGACCCCACCAACATCGACACCTCCACCCTCACCTTCCACGGCACCGACAAACCGGCCACCCCCGGACC
GATCGCCGGCATCGGGTCGGTGCCCGCATGA

Protein sequence :
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEPAAAGTAPGEA
APSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLSQRIVKGEVPETLK
DKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT
TLDEYRKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFLPDKAIDLI
DEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQDFERAAQLRDTEKQLLGQKAQREKEWKAGDLDVVTEVDDEQ
IAEVLGNWTGIPVYKLTEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS
KALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPFSVVLFDEIEKAHPDVFNTLLQILE
DGRLTDGQGRIVDFKNTVIILTTNLGTRDVAKAVSLGFQASDDSDSNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQL
RHQEILSIVDIMIGRIETQLRNKDMGLELTDNAKKYLATKGFDPVLGARPLRRTIQRDIEDNLSERILFNELTPGQIIVV
DCDGDPTNIDTSTLTFHGTDKPATPGPIAGIGSVPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sare_2192 YP_001537044.1 ATPase VFG0079 Protein 0.0 60
Sare_2192 YP_001537044.1 ATPase VFG0080 Protein 3e-147 51