Gene Information

Name : Sare_1963 (Sare_1963)
Accession : YP_001536839.1
Strain : Salinispora arenicola CNS-205
Genome accession: NC_009953
Putative virulence/resistance : Virulence
Product : amino acid permease-associated protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 2258281 - 2259687 bp
Length : 1407 bp
Strand : +
Note : PFAM: amino acid permease-associated region; KEGG: gka:GK2269 amino acid transporter

DNA sequence :
ATGAGTCTTCATGGTGACCTTGCTAAATACGGCTATCGCCAGGAGTTGAGTCGACAACTCCGGTTCCGGGACCTGCTGGC
GTATGGGCTGGTGTATATGGTGCCGATCGCGCCGATGGCGATTTTCGGTAGTGTGTATGCCGGTTCTGGTGGCATGGTGG
CACTTGCCTATGTGATCGGTGTGGTCGCGTTGGTGTTCACTGCGTTTTCGTATGCGCAGATGGTACGGGCGTTCCCGATG
TCGGGCAGCGTTTACAACTATGCGGGTCGGGGTATCAGCCCTCCAGTCGGTTTCCTCGCCGGGTGGGTGATCCTGCTGGA
CTATGTGCTCGTGCCGGGCCTGCTGTATTTGGTGGCGTCGGTGGCGATGCACGCGACCGTGCCAGTAGTGCCGGTGTGGT
TGTGGCTGATCGGGTTCGTCGCGGTCAACACGATCGTCAACTCGGTCGGCATCCGGATGACCGCGATGGTGACCCGGGTG
ATGCTCGTCGGCGAGCTGATCGTCCTGGCGATCTTCCTCGCTGTCGCCGGCTGGGCCCTCGCCTCGGGCAGGGGGCGGTT
TAGTTGGGAGGCCTTCTACAACGCCAACACGTTCACCTGGTCGCTTGTTGCCGGCGCCGTGTCGATCGCGGTGCTGTCCT
TCCTCGGCTTCGATGGCATCTCGATGCTGGCGGAGGAGGCCAAGGGCGGCTCTCGGCAGATCGGTCGGGCGATGGCCGCT
GTGCTGGTCCTGGCTGGCGTGTTGTTCATCGCGCAGACGTGGCTGGCCGCGATGCTCGTTGCCGAGCCGGCCTCCCTGCG
CGGTGATGGGGATCCGGACGGCACGGCCTTCTACGAGGCGGCTGCGGTGGCCGGTGGGGGCTGGCTGGCGACCTTGTGCG
CGGTCGCGACCGCGATCGCATGGGGATTGCCGAATTCGATGGTGGCGCAGGTGGCCACATCGCGGCTGTTGTATGCGATG
GCCCGGGACCGGCAGTTGCCCGCCTTTTTGGCGAAGGTGTCGGTACGCCGCAGCGTGCCGATCAACGCGACCCTGCTCAC
CGGTGCCGTGTCTCTGGTGTTGGGCCTGTCCATGGCGGCCCGGGCGGACGGGATCACACTGCTGTCGTCGCTGATCAACT
TCGGGGCGATGGTGGCGTTCCTGGTCCTGCACGTCAGCGTGATCGTGCACCACCTCATCCGCCGGCGCAGCCGCAACTGG
TGGGCGCATCTGGTCATGCCCGCTGTCGGATTCGCGATTCTCTCCTACGTCGTGGTCAACGCCGATATCGCCGCGCAGCG
CCTCGGTCTGACCTGGCTCGCCCTTGGGGTCCTTGTCCTCGCCGGCCTGTACCTGTCCGGTCGCCGGCCGGCCCTGTCGG
GCCTGGCGCCCGCGCAGACACACGATCATGAGATGGAGCGAGTGTGA

Protein sequence :
MSLHGDLAKYGYRQELSRQLRFRDLLAYGLVYMVPIAPMAIFGSVYAGSGGMVALAYVIGVVALVFTAFSYAQMVRAFPM
SGSVYNYAGRGISPPVGFLAGWVILLDYVLVPGLLYLVASVAMHATVPVVPVWLWLIGFVAVNTIVNSVGIRMTAMVTRV
MLVGELIVLAIFLAVAGWALASGRGRFSWEAFYNANTFTWSLVAGAVSIAVLSFLGFDGISMLAEEAKGGSRQIGRAMAA
VLVLAGVLFIAQTWLAAMLVAEPASLRGDGDPDGTAFYEAAAVAGGGWLATLCAVATAIAWGLPNSMVAQVATSRLLYAM
ARDRQLPAFLAKVSVRRSVPINATLLTGAVSLVLGLSMAARADGITLLSSLINFGAMVAFLVLHVSVIVHHLIRRRSRNW
WAHLVMPAVGFAILSYVVVNADIAAQRLGLTWLALGVLVLAGLYLSGRRPALSGLAPAQTHDHEMERV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf48 NP_460344.1 amino acid permease Not tested SPI-2 Protein 6e-65 42
ycjj YP_216387.1 amino acid permease Not tested SPI-2 Protein 6e-65 42
ORF48 CAA68204.1 amino acid permease YeeF like protein Not tested SPI-2 Protein 1e-61 41
STY1743 NP_456146.1 putative amino acid permease Not tested SPI-2 Protein 1e-64 41
t1247 NP_805052.1 amino acid permease Not tested SPI-2 Protein 1e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sare_1963 YP_001536839.1 amino acid permease-associated protein VFG0480 Protein 3e-65 42