Gene Information

Name : Sare_1703 (Sare_1703)
Accession : YP_001536581.1
Strain : Salinispora arenicola CNS-205
Genome accession: NC_009953
Putative virulence/resistance : Unknown
Product : RNA-binding S1 domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 1968167 - 1970560 bp
Length : 2394 bp
Strand : -
Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: stp:Strop_1706 RNA binding S1 domain protein

DNA sequence :
GTGACCCTCTCTGTTCATCAGCGGATCGCCGAGGAACTCGGCGTCGCCGAGCGCCAGGTACGCGCAGCCGTGGAACTACT
CGACGGCGGCGCGACCGTGCCGTTCATCGCCCGCTACCGCAAGGAGGCCACCGGCCTGCTCGACGACACCCAGCTGCGCA
CCCTCGAGGAGCGGATGCGCTACCTGCGCGAGTTGGACCAGCGCCGGACTGCGGTCCTGGAGTCGATCCGGGGCCAGGGC
AAGCTCGACGAGACCCTGACGGCACAGATCATGGCAGCCGACTCGAAGTCTCGGCTGGAGGACATCTATCTGCCGTACAA
GCCGAAGCGGCGGACCCGGGCACAGATCGCGCGCGAGGCTGGACTGGAGCCACTCGCCGACACACTGCTCGACGATCCCG
CCCAAGACCCACGCGCGACGGCCGTCAGGTTCGTCGACCCGGACCGGGGCATCGCCGACCCGTCCGCCGCACTGGACGGT
GCCCGCGCCATCCTCGTCGAACGGTTCGCCGAGGACGCCGACCTGATCGGCACGCTACGCGAGCAGATGTGGTCACGGGG
CCGGCTGGTGTCCCGGGTACGCGATGGTCAGGCCACGGCCGGCGCCAAGTTCGCCGACTACTTCGACTTCGCCGAGCCGT
ACCCGAAACTGCCCTCGCACCGGGTCCTCGCCGTGTTCCGGGGGGAGAAGGAGGGTGTGCTCGACCTGACCATGGAGCCG
GAGCAGCAGGAGAACCCGGATCCAGCGACCACCGGTCCGACCCGGTACGAGGCGGCCGTCGCCGCCCGGTTCGGGGTCAG
TGACCGGGGACGGCCGGCCGACCGGTGGCTCTCCGACACGGTGCGCTGGGCCTGGCGTACCCGAATCCTGATCCACCTCG
GCGCGGACCTTCGCATGCGGTTGTGGCAGGCCGCCGAGCAGGAAGCGGTGCGGGTCTTCGCCACGAACCTGCGGGACCTG
CTGCTGGCCGCCCCGGCCGGGGCCCGGACGACGATGGGCCTGGATCCCGGCCTGCGCACCGGGGTGAAGGTCGCCGTCGT
TGACGCGACGGGCAAGGTGGTCGCCACCGACACCATCTACCCGCACGAGCCGCGCCGGCAGTGGGACGCCTCGATCGAGA
CCCTCGCCCGTCTCGCCACCGCGCACCAGGTCGAGTTGGTCGCGATTGGTAACGGCACCGCGAGCCGGGAGACCGACCGA
CTCGCCGCAGAGCTGATCCGGCGCCACCCACAGCTGAACCTCACCAAGCTCGTCGTGTCCGAAGCCGGCGCTTCGGTCTA
CTCAGCGTCCGCGTACGCCGCGCAGGAGCTGCCGGGCCTGGACGTGTCGCTGCGGGGGGCGGTCTCCATCGCCCGTCGCC
TCCAGGACCCACTCGCCGAACTGGTCAAGATCGATCCCCGGTCCATCGGAGTCGGGCAGTACCAACACGACCTGTCCGAG
GTGACGTTGTCCCGGTCGCTCGACGCGGTGGTCGAGGACTGCGTCAACGCGGTCGGCGTCGACGTCAACACCGCCTCCGC
GCCACTGCTGACCCGGGTCTCCGGCATCGGTGCCGGACTGGCGGAGAACATCGTGCTGCACCGGGACGCCAACGGGCCCT
TCCGAACCCGGGGCGACCTGCGACGGGTACCCCGGCTTGGTCCGAAGGCATTCGAGCAGTGCGCGGGCTTCCTGCGCATC
CCCGACGGTGCCGACCCGCTGGACTCGTCGAGCGTGCACCCGGAGGCGTACCCGGTGGTGCGGCGGATCCTCGCCGCCAC
GAAGCAGGAACTGCGGATGGTGATCGGCCGCAGCGCGGTCCTGCGCGGGCTGCGGGCCGCCGATTTCGTCGACGAGACCT
TCGGGCTGCCGACGGTCACCGACATCCTCGCCGAGTTGGAGAAACCCGGCCGGGATCCGCGGCCGGAATTCCGCACCGCC
ACGTTCACCGAGGGCGTGGAGACGATCACCGACCTGGTGCCCGGGCTGATCCTCGAGGGCGTGGTCACCAACGTCGCCGC
CTTCGGCGCGTTCGTGGACGTCGGCGTGCATCAGGATGGCCTGGTACATGTCTCGGCGATGTCCCGCGCCTTCGTTCGCG
ACCCTCGCGAGGTGGTGAAGTCCGGTGACGTGGTGAAGGTCAAGGTCCTCGACGTGGACGTGCCACGCAAGCGCATCTCG
CTGACCCTTCGACTGAACGATACCGAGGCCGGTCGCGGCGGAGCGCATGGCCAGCGGGACCGCGGTGGCGACCGGGAGGC
CAACCGCGGCGAGTCCCGAGGCCGCGGTGGGCAGCAGGCCCGCGGTGGGCAGCAGGCCCGCGGTGGGCAGCCGCAACCCA
GACGTGGCGGCGCCACGCCGCCCCCGGCCAACGACGCGATGGCCGATGCCCTGCGTCGCGCCGGCCTCGCCTGA

Protein sequence :
MTLSVHQRIAEELGVAERQVRAAVELLDGGATVPFIARYRKEATGLLDDTQLRTLEERMRYLRELDQRRTAVLESIRGQG
KLDETLTAQIMAADSKSRLEDIYLPYKPKRRTRAQIAREAGLEPLADTLLDDPAQDPRATAVRFVDPDRGIADPSAALDG
ARAILVERFAEDADLIGTLREQMWSRGRLVSRVRDGQATAGAKFADYFDFAEPYPKLPSHRVLAVFRGEKEGVLDLTMEP
EQQENPDPATTGPTRYEAAVAARFGVSDRGRPADRWLSDTVRWAWRTRILIHLGADLRMRLWQAAEQEAVRVFATNLRDL
LLAAPAGARTTMGLDPGLRTGVKVAVVDATGKVVATDTIYPHEPRRQWDASIETLARLATAHQVELVAIGNGTASRETDR
LAAELIRRHPQLNLTKLVVSEAGASVYSASAYAAQELPGLDVSLRGAVSIARRLQDPLAELVKIDPRSIGVGQYQHDLSE
VTLSRSLDAVVEDCVNAVGVDVNTASAPLLTRVSGIGAGLAENIVLHRDANGPFRTRGDLRRVPRLGPKAFEQCAGFLRI
PDGADPLDSSSVHPEAYPVVRRILAATKQELRMVIGRSAVLRGLRAADFVDETFGLPTVTDILAELEKPGRDPRPEFRTA
TFTEGVETITDLVPGLILEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSRAFVRDPREVVKSGDVVKVKVLDVDVPRKRIS
LTLRLNDTEAGRGGAHGQRDRGGDREANRGESRGRGGQQARGGQQARGGQPQPRRGGATPPPANDAMADALRRAGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 60