Gene Information

Name : Sare_0120 (Sare_0120)
Accession : YP_001535046.1
Strain : Salinispora arenicola CNS-205
Genome accession: NC_009953
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 133520 - 136111 bp
Length : 2592 bp
Strand : +
Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: stp:Strop_0121 ATPase AAA-2 domain protein

DNA sequence :
ATGAACACCGAACGACTCACCACGAAGAGCCGCGAGACCATCACCCGTGCCGTCGCACTCGCCGGTCAGGGCGGACACGC
CACCGTGGAGCCCTGGCACCTGCTGCTGTCCCTGCTGGACACCGAAGGATCGACCGCGGCCGGCCTGCTGCGCGCCGCGG
GGGCTGACCCCGACGAGCTGCGCCGCGTCGCCCAGCGTGCGGTGGACGCGTTGCCCGTCGCCCGTGGCTCCAGCGTCGCC
GAGCCGACCCTGGCCCGCGAGTTCGTCAACGCCATCGGTGCCGCCGAACAGATCGCCCGTCCGCTCGGCGACGAGTACAC
CTCGACCGAGCACCTGCTCGCCGGTTTGGCCCAGGTCGGTGGCGCGGTGTCGGCGGCGCTCAAGGCCGCCGGGGCCACCG
AGGACGCGCTGGTGGCCTCGTTCCCAACCGTTCGGGGTGGGGACCGTCGAGTCACCACCGCCGACCCGGAGCAGACCTAC
CAGGCCCTCGCCAAGTACGGCGTCGACCTGACCGCCAGCGCCCGGGACGGCCGCACCGACCCGGTGATCGGCCGGGACAC
CGAGATCCGCCGGGTGATCCAGGTGCTGTCTCGGCGGACGAAGAACAACCCGGTCCTGATCGGTGAGCCGGGCGTCGGCA
AGACCGCCATCGTCGAGGGCCTGGCCCAGCGGATCGTCGCCGGGGACGTACCCGAGTCACTGCGGGACAAGAAGCTGGTC
TCCCTGGACCTTGGTGCCATGGTGGCCGGTGCGTCCTACCGGGGTCAGTTCGAGGAGCGGCTGAAGTCCGTCCTCGAGGA
GATCAAGAACTCGGACGGCCAGGTCATCACCTTTCTCGACGAACTGCACACCGTCGTCGGCGCCGGCAAGGGTGAGGGTT
CGATGGACGCCGGCAACATGCTCAAGCCGATGTTGGCCCGTGGCGAGTTGCGGATGGTGGGCGCGACAACCCTGGACGAG
TACCGCGAGCACATCGAGTCCGACCCAGCCCTGGAGCGTCGCTTCCAGCCGGTGTTGGTCGGCGAGCCCACCATCGAGGA
CACCGTCGGCATCCTGCGGGGCCTCAAGGAGCGGTACGAGGTACACCACGGCGTGCGTATCACCGACGGAGCGCTGGTCG
CCGCCGCCACCCTGTCCGACCGCTACATCACCGACCGGTTTCTGCCCGACAAGGCCATCGACCTGGTGGACGAGTCCGCT
TCCCGGCTGCGGATGGAGATCGACTCCCGGCCGGTCGAGGTGGACGAGATCGAGCGGGCGGTACGCCGGCTCGAAATCGA
GGAGATGGCGCTGGCGAAGGAGTCGGACGACGCCTCCGTTGAGCGGCTGGAGCGGCTCCGCAAGGAACTGGCCGACAAAC
GTGAACAGCTCACCGCCCTGTCCGAGCGTTGGCAGACCGAGAAGGGGCACATCACCAGGCTCTCGACCGCCAAGGAGGAA
CTGGAGCGCCTCAGCGGTGAGGCCGAGCGGGCCGAGCGCGACGGAGAGTTGGAGCGCGCCGCCGAGCTGCGGTACGGACG
CATCCCGGCACTCAAGGTCGACCTGACCCAGGCGGCCGAGGAACTGGCCCGACTCCAGGCAGACGGCGCGATGCTCAAGG
AGGAGGTCGGCGCCGACGACATTGCCGCCGTGGTCGCCTCCTGGACCGGCATCCCCGCTGGCCGTATGCTCGAGGGCGAG
ACCGCGAAATTGCTCCGGATGGAGACGTCGCTCAGCGAGCAGGTGGTTGGCCAGGAGCGTGCCGTGGGCGCCGTCGCCGA
CGCCGTCCGGCGGGCCCGCGCCGGCATCGCGGACCCGGACCGCCCGACCGGCAGCTTCCTCTTCCTCGGCCCGACCGGTG
TCGGCAAGACGGAGCTGGCCAAGGCGCTCGCGGGGTTCCTTTTCGACGACGAGCGGGCAATGGTTCGGATCGACATGAGT
GAGTATGGTGAGAAGCACTCCGTGGCCCGCCTGGTCGGTGCCCCACCTGGCTACGTCGGGTACGAGGAGGGTGGCCAGCT
CACCGAGGCGGTGCGCCGCCGACCGTACTCGGTGATCCTGCTCGACGAGGTGGAGAAGGCCCACCCGGACGTCTTCGACG
TGCTGCTCCAGGTGCTTGACGATGGGCGGCTCACCGACGGCCAGGGCCGGACGGTGGACTTCCGCAACACCATCCTGATC
CTCACCTCCAACCTCGGGTCGTCGGTGATCGGCGACCTGACGCTGGCCGAGGAGCAGCGCCGTGAGGGCGTCCTGGCGGT
GGTCCGGTCGCACTTCAAGCCGGAGTTCCTCAACCGCCTCGACGACACGATGGTGTTCGCCGCACTCCAGGGCGATGACC
TCCGGGCCATCGTGGACATCCAGCTGGACCGGATGCGCCGCCGGCTCGCCGACCGCCGGCTGGGCCTGGAGATCACCGAC
CCGGCTCGAAGGTGGCTCGCCGAGCACGGCTACGACGCGATCTACGGCGCCCGCCCGCTGCGTCGCCTGGTGCAGACCGC
CATCGGCGACCAGTTGGCGAAGGCCCTCCTGGCCGGACGGATCCGCGACGGTGACACGGTCCGGGTGGGCCTGTCGGACA
CCGGGGACTCCCTCACCGTGACCGCCACGTAG

Protein sequence :
MNTERLTTKSRETITRAVALAGQGGHATVEPWHLLLSLLDTEGSTAAGLLRAAGADPDELRRVAQRAVDALPVARGSSVA
EPTLAREFVNAIGAAEQIARPLGDEYTSTEHLLAGLAQVGGAVSAALKAAGATEDALVASFPTVRGGDRRVTTADPEQTY
QALAKYGVDLTASARDGRTDPVIGRDTEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKKLV
SLDLGAMVAGASYRGQFEERLKSVLEEIKNSDGQVITFLDELHTVVGAGKGEGSMDAGNMLKPMLARGELRMVGATTLDE
YREHIESDPALERRFQPVLVGEPTIEDTVGILRGLKERYEVHHGVRITDGALVAAATLSDRYITDRFLPDKAIDLVDESA
SRLRMEIDSRPVEVDEIERAVRRLEIEEMALAKESDDASVERLERLRKELADKREQLTALSERWQTEKGHITRLSTAKEE
LERLSGEAERAERDGELERAAELRYGRIPALKVDLTQAAEELARLQADGAMLKEEVGADDIAAVVASWTGIPAGRMLEGE
TAKLLRMETSLSEQVVGQERAVGAVADAVRRARAGIADPDRPTGSFLFLGPTGVGKTELAKALAGFLFDDERAMVRIDMS
EYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILI
LTSNLGSSVIGDLTLAEEQRREGVLAVVRSHFKPEFLNRLDDTMVFAALQGDDLRAIVDIQLDRMRRRLADRRLGLEITD
PARRWLAEHGYDAIYGARPLRRLVQTAIGDQLAKALLAGRIRDGDTVRVGLSDTGDSLTVTAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 9e-98 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sare_0120 YP_001535046.1 ATPase VFG2076 Protein 8e-112 45
Sare_0120 YP_001535046.1 ATPase VFG2084 Protein 2e-106 43