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Name : rph (Sare_0994) Accession : YP_001535896.1 Strain : Salinispora arenicola CNS-205 Genome accession: NC_009953 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 1117642 - 1118367 bp Length : 726 bp Strand : + Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGGCGCGACCTGACGGGCGGCTGCCCGACCACCTTCGACCGGTGACCCTGACCAGAGGTTGGAGCACCCATCCCGAGGG CTCCGTGCTGGTGGAGTTCGGTGCCACCCGCGTCTTGTGCACCGCGAGTGTCACCGAGGGGGTGCCCCGCTGGCGCAAGG GCTCCGGGCTCGGCTGGGTCACCGCCGAGTACGCGATGCTGCCCCGCGCCACCAACACCCGCTCCGACCGGGAGAGCGTC AAGGGGCGGGTCGGTGGGCGTACCCACGAGATCTCCCGGTTGATCGGCCGGAGCCTGCGGGCGTCGATCGACCTGAAGGC GCTGGGTGAGAACTCCGTCGTGCTCGACTGCGACGTGCTTCAGGCCGACGGCGGCACCCGCACGGCCGCGATCACCGGCG CGTACGTGGCACTGTACGACGCGGTGACCTGGCTCGCTGCGCGTCGGTCCCTCGCCGGTCGTCCGGAGAACGTGATGCAC CGTTCGGTGGCCGCGGTGAGTGTCGGTGTCGTCGCCGGTGAACCGCGGCTGGACCTCAACTACGACGAGGACGCGACCGC CGAGGTCGACCTGAACGTGGTGTGCACCGGCACCGGCGACTTCGTCGAGGTACAAGGCACGGGTGAGGCGGGAGTCTTCA GCCGCGGACAGCTCGACGCCCTGCTCGACCTGGCCGTCGCCGGCTGCCTGGACCTGGCCGAAGCCCAGCGGAAGGCGCTC TCGTGA Protein sequence : MARPDGRLPDHLRPVTLTRGWSTHPEGSVLVEFGATRVLCTASVTEGVPRWRKGSGLGWVTAEYAMLPRATNTRSDRESV KGRVGGRTHEISRLIGRSLRASIDLKALGENSVVLDCDVLQADGGTRTAAITGAYVALYDAVTWLAARRSLAGRPENVMH RSVAAVSVGVVAGEPRLDLNYDEDATAEVDLNVVCTGTGDFVEVQGTGEAGVFSRGQLDALLDLAVAGCLDLAEAQRKAL S |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 2e-59 | 60 |
