Gene Information

Name : Dshi_0875 (Dshi_0875)
Accession : YP_001532221.1
Strain : Dinoroseobacter shibae DFL 12
Genome accession: NC_009952
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 891165 - 891431 bp
Length : 267 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAGAAGCCGTTTCAGTGAAGAACAGATCATTGGCATTCTTAAGGAGCACCAGGCTGGGTTGGGCGCGAAGGAGTT
GTGTCGCAAGTACGGGATCAGTGACGCGACCTTCTACAAGTGGCGATCCAAGTATGGTGGCATGGAAGTGTCAGATGCGC
GACGTTTGAAGACGCTGGAATCTGAGAACGCCAAACTGAAGAAGATGCTGGCTGAGCAGATGATGGATGTTGCGACGCTT
AAGGAAATGCTTGGAAAAAACTTCTGA

Protein sequence :
MKRSRFSEEQIIGILKEHQAGLGAKELCRKYGISDATFYKWRSKYGGMEVSDARRLKTLESENAKLKKMLAEQMMDVATL
KEMLGKNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 3e-21 59
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 3e-21 59
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 7e-21 59
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 6e-21 57
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 9e-17 49
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 6e-17 49
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 4e-19 44