Gene Information

Name : ipgm (Dshi_0089)
Accession : YP_001531439.1
Strain : Dinoroseobacter shibae DFL 12
Genome accession: NC_009952
Putative virulence/resistance : Unknown
Product : phosphoglyceromutase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0696
EC number : 5.4.2.1
Position : 87158 - 88675 bp
Length : 1518 bp
Strand : +
Note : catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate

DNA sequence :
ATGACTGCGCCGAAACCAGTGGTGTTGTGTATTCTCGATGGCTGGGGGCTGGACCCGGACGGGCCAGCGAACGCGCCGTT
GCTGGCCGACACGCCTGTCATGGATCGGCTCATGGCGACCTGCCCGAATGCGACGCTGACGACCTTCGGCCCGGATGTGG
GCCTGCCCTCCGGCCAGATGGGCAATTCCGAGGTTGGGCATACCAATATCGGGGCGGGCCGGGTGGTGGCGATGGACCTC
GGGCAGATCGATCTGGCGATCGAGGATGGCAGCTTTGCGCGCAACCCGGCGCTCACGGGTTTCATCGACCGGCTGAAATC
CAGCGGGGGGACCGCGCATCTGATGGGTGTGGCATCGGACGGTGGCGTGCATGGCCACACGGATCACATTATCGCAGCGG
CCAAGGCGGTGGCCGGGGCCGGGGTTCCGGTTGTGCTCCATGCGATCACCGATGGGCGCGACGTCGCGCCGAAATCCGCT
GATCGTTTCATGCCCGCACTTGAGGCTGCGTTGCCCGAGGGCGCGCGGATCGGCACTGTGATCGGGCGCTATTACGCAAT
GGATCGGGACAACCGCTGGGACCGGGTCGCGCGCGCCTTCGTCGCCATGGTCCGCGCCCAGGGTGAGACCGCCGAGAGCG
CCCAGGCAGCCGTGGCCGCCGCTTACGGGAGGGGCGAGACGGACGAATTCATCGCCCCCACGGTGATCGGGGGGTATGCA
GGCATGCGGGATGGCGACGGGATCTTCTGTCTGAACTTCCGGGCCGATCGGGCGCGCGAGATCCTGCGCGCCATGGCCCA
GCCGGATTTCGACGCCTTCGATCCCGCGGGCCTGCCAGACTTCGCCGCCAAGCTGGGCATGGTGTCCTATTCCGACGAGC
ATGATGGCTGGTTCGATATCGTTTTTCCCAAGCGCGAAATCGTCAATACCCTCGGCGCCTGGGTCGCCAAGCAGGGATTG
CGGCAGTTCCGCCTCGCCGAGACCGAAAAATACCCGCATGTCACTTTCTTTCTGAATGGCGGGCAGGAGACGCCCGAGAC
CGGGGAGGACCGTTTCATGCCCGACTCGCCCAAGGTGGCGACCTATGACCTGCAGCCCGAGATGAGCGCCGAGGAAGTGT
CTGACAGTTTCGTGGCGGCGATCGAGGCGGGCTACGACTTGATCGTGGTGAACTACGCCAACCCGGATATGGTCGGGCAT
ACCGGCGATCTGGAGGCGGCGAAGGCCGCTTGTACGGCAGTGGATACAGGGCTCGGGCGCGCGCTTGCGGCCCTGGAGGT
CGCGGGCGGTGCGATGATCGTCACCGCCGATCACGGCAATTGCGAAACGATGATCGACCCGGAGACCGGCGGTACGCATA
CCGCCCATACCCTGAACCCGGTGCCGGTGATCCTCGTGGGCGGGCCGGAGGGGGCGACGCTTGCACCGGGGCGGCTAGCC
GATCTTGCGCCGACGATCCTGCACCTGATGCACTTGCCGCAGCCGGTGGAAATGACCGGCCGAAGTCTGATCCGGTGA

Protein sequence :
MTAPKPVVLCILDGWGLDPDGPANAPLLADTPVMDRLMATCPNATLTTFGPDVGLPSGQMGNSEVGHTNIGAGRVVAMDL
GQIDLAIEDGSFARNPALTGFIDRLKSSGGTAHLMGVASDGGVHGHTDHIIAAAKAVAGAGVPVVLHAITDGRDVAPKSA
DRFMPALEAALPEGARIGTVIGRYYAMDRDNRWDRVARAFVAMVRAQGETAESAQAAVAAAYGRGETDEFIAPTVIGGYA
GMRDGDGIFCLNFRADRAREILRAMAQPDFDAFDPAGLPDFAAKLGMVSYSDEHDGWFDIVFPKREIVNTLGAWVAKQGL
RQFRLAETEKYPHVTFFLNGGQETPETGEDRFMPDSPKVATYDLQPEMSAEEVSDSFVAAIEAGYDLIVVNYANPDMVGH
TGDLEAAKAACTAVDTGLGRALAALEVAGGAMIVTADHGNCETMIDPETGGTHTAHTLNPVPVILVGGPEGATLAPGRLA
DLAPTILHLMHLPQPVEMTGRSLIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00298 YP_008207763.1 Phosphoglyceromutase Not tested AbaR25 Protein 8e-90 48
BJAB0868_00302 YP_008211628.1 Phosphoglyceromutase Not tested AbaR26 Protein 8e-90 48