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Name : deoA (Dshi_0828) Accession : YP_001532174.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.4 Position : 835752 - 837059 bp Length : 1308 bp Strand : + Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate DNA sequence : GTGACCGCGCGGACGGTGATCGCGGCGGTGCGGGACGGCGCGCCGGTGGTGGCGGAGGACCTGCGCGCCTTCGCCCGGGG CCTCGCCTCCGGCACGGTCAGCGATGCCCAGGCCGGGGCCTTCGCCATGGCGGTCCTGTTGCGGGGCTTGGGCGATGCGG GGCGCGTGGCGCTGACGCAAGCCATGCGCGACAGTGGCGATGTGCTGGCCTGGGACCTGCCCGGGCCGGTGCTCGACAAG CATTCCACGGGCGGGATCGGGGATACGGTGTCGCTCCTGCTGGCCCCGGCGCTGGCGGCCTGCGGGGCTTACGTGCCGAT GATCTCGGGCCGGGGGCTGGGTCATACGGGCGGCACGCTCGACAAACTCGAGGCGCTGGAGGGCTACCGCACCGACATTT CCGAGGATGCGCTGAGGGCGGTGGTGGCCGAGACCGGCTGCGCCATCGTCGGGGCCACGGGCCAGATCGCGCCCGCGGAC CGGCGGCTCTATGCCATCCGCGACGTCACCGCCACGGTCGAAAGCATCGACCTGATCACCGCCTCGATCCTGTCCAAGAA GCTCGCGGCGGGGCTGGGCGGGCTGGTGCTGGATGTCAAATGCGGCTCGGGCGCGTTTCTGACCGACCCCGCAGCGGCCC GGGATCTGGCGCAGGCGCTGGTGCGCACGGCCAATGGCGCGGGCTGTCCCACCTGGGCGCTGCTGACGGATATGGATGAG AGCCTCGCCAGTGCCGCGGGCAATGCGCTGGAGGTGGCGGAGGTGCTGCGTATCCTGCGGGGCGACGCGACGAGCCCGCG CCTGCGCGCGGCGACCGTGGCCCTGGGCGGGGCGCTGCTGGCCCTGGGCGGGCTGGCGGACGACCCCGCGGACGGGGCTG CACGGATCGACGCCACCCTGCGCGATGGCCGCGCGGCGGAGGTTTTCGCCCGCATGGTCGCTGCCCTTGGCGGGCCGCGC GACGTGGTGGCCACGGGCCTTGCCGGTTTGCCCGAGGCGCCGGTGGTGCGCGAAGTGCCCGCACCCGCGGCGGGCGTGCT GACCGCCTGCGATGCCAAGGCGCTGGGCTGGGCGGTGGTGTCCCTGGGCGGCGGACGGCAGGTGGAAACCGACCCGGTCG ACCCGGCGGTGGGCCTGTCGGATATCGCCCCGCTCGGCACCCGCGTCGTCCGGGGCGAGCCCATCGCCCGGGTCCATGCC GCCCGCGAAGAGGCCGCCGACCGCGCCGTGGCCGAGGTTCAGGCGGCCTTCACCCTCGGCACGAGTTTCGACGCGAAGCC GCTTGTCCTCGGAGAGGTCCGCCCATGA Protein sequence : MTARTVIAAVRDGAPVVAEDLRAFARGLASGTVSDAQAGAFAMAVLLRGLGDAGRVALTQAMRDSGDVLAWDLPGPVLDK HSTGGIGDTVSLLLAPALAACGAYVPMISGRGLGHTGGTLDKLEALEGYRTDISEDALRAVVAETGCAIVGATGQIAPAD RRLYAIRDVTATVESIDLITASILSKKLAAGLGGLVLDVKCGSGAFLTDPAAARDLAQALVRTANGAGCPTWALLTDMDE SLASAAGNALEVAEVLRILRGDATSPRLRAATVALGGALLALGGLADDPADGAARIDATLRDGRAAEVFARMVAALGGPR DVVATGLAGLPEAPVVREVPAPAAGVLTACDAKALGWAVVSLGGGRQVETDPVDPAVGLSDIAPLGTRVVRGEPIARVHA AREEAADRAVAEVQAAFTLGTSFDAKPLVLGEVRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 1e-44 | 41 |
